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人神经丝氨酸蛋白酶抑制剂的稳定性和活性由一个稳定反应中心环的盐桥调节。

The stability and activity of human neuroserpin are modulated by a salt bridge that stabilises the reactive centre loop.

作者信息

Noto Rosina, Randazzo Loredana, Raccosta Samuele, Caccia Sonia, Moriconi Claudia, Miranda Elena, Martorana Vincenzo, Manno Mauro

机构信息

National Research Council of Italy, Institute of Biophysics, Palermo, Italy.

Department of Medical Biotechnologies and Translational Medicine, University of Milan, Milan, Italy.

出版信息

Sci Rep. 2015 Sep 2;5:13666. doi: 10.1038/srep13666.

Abstract

Neuroserpin (NS) is an inhibitory protein belonging to the serpin family and involved in several pathologies, including the dementia Familial Encephalopathy with Neuroserpin Inclusion Bodies (FENIB), a genetic neurodegenerative disease caused by accumulation of NS polymers. Our Molecular Dynamics simulations revealed the formation of a persistent salt bridge between Glu289 on strand s2C and Arg362 on the Reactive Centre Loop (RCL), a region important for the inhibitory activity of NS. Here, we validated this structural feature by simulating the Glu289Ala mutant, where the salt bridge is not present. Further, MD predictions were tested in vitro by purifying recombinant Glu289Ala NS from E. coli. The thermal and chemical stability along with the polymerisation propensity of both Wild Type and Glu289Ala NS were characterised by circular dichroism, emission spectroscopy and non-denaturant gel electrophoresis, respectively. The activity of both variants against the main target protease, tissue-type plasminogen activator (tPA), was assessed by SDS-PAGE and chromogenic kinetic assay. Our results showed that deletion of the salt bridge leads to a moderate but clear reduction of the overall protein stability and activity.

摘要

神经丝氨酸蛋白酶抑制剂(NS)是一种属于丝氨酸蛋白酶抑制剂家族的抑制性蛋白,参与多种病理过程,包括伴有神经丝氨酸蛋白酶抑制剂包涵体的家族性脑病痴呆症(FENIB),这是一种由NS聚合物积累引起的遗传性神经退行性疾病。我们的分子动力学模拟揭示了s2C链上的Glu289与反应中心环(RCL)上的Arg362之间形成了一个持久的盐桥,该区域对NS的抑制活性很重要。在这里,我们通过模拟不存在盐桥的Glu289Ala突变体来验证这一结构特征。此外,通过从大肠杆菌中纯化重组Glu289Ala NS在体外测试了分子动力学预测。分别通过圆二色性、发射光谱和非变性凝胶电泳对野生型和Glu289Ala NS的热稳定性、化学稳定性以及聚合倾向进行了表征。通过SDS-PAGE和显色动力学分析评估了这两种变体对主要靶标蛋白酶组织型纤溶酶原激活剂(tPA)的活性。我们的结果表明,盐桥的缺失导致整体蛋白质稳定性和活性适度但明显降低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5d0/4556959/d918ddb3feaf/srep13666-f1.jpg

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