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一种用于即时护理肝毒性评估中基因表达分析的集成组织样本制备和多重逆转录定量聚合酶链反应的芯片实验室系统。

A lab-on-a-chip system integrating tissue sample preparation and multiplex RT-qPCR for gene expression analysis in point-of-care hepatotoxicity assessment.

作者信息

Lim Geok Soon, Chang Joseph S, Lei Zhang, Wu Ruige, Wang Zhiping, Cui Kemi, Wong Stephen

机构信息

Nanyang Technological University, 71 Nanyang Dr, 638075 Singapore.

出版信息

Lab Chip. 2015 Oct 21;15(20):4032-43. doi: 10.1039/c5lc00798d. Epub 2015 Sep 2.

DOI:10.1039/c5lc00798d
PMID:26329655
Abstract

A truly practical lab-on-a-chip (LOC) system for point-of-care testing (POCT) hepatotoxicity assessment necessitates the embodiment of full-automation, ease-of-use and "sample-in-answer-out" diagnostic capabilities. To date, the reported microfluidic devices for POCT hepatotoxicity assessment remain rudimentary as they largely embody only semi-quantitative or single sample/gene detection capabilities. In this paper, we describe, for the first time, an integrated LOC system that is somewhat close to a practical POCT hepatotoxicity assessment device - it embodies both tissue sample preparation and multiplex real-time RT-PCR. It features semi-automation, is relatively easy to use, and has "sample-in-answer-out" capabilities for multiplex gene expression analysis. Our tissue sample preparation module incorporating both a microhomogenizer and surface-treated paramagnetic microbeads yielded high purity mRNA extracts, considerably better than manual means of extraction. A primer preloading surface treatment procedure and the single-loading inlet on our multiplex real-time RT-PCR module simplify off-chip handling procedures for ease-of-use. To demonstrate the efficacy of our LOC system for POCT hepatotoxicity assessment, we perform a preclinical animal study with the administration of cyclophosphamide, followed by gene expression analysis of two critical protein biomarkers for liver function tests, aspartate transaminase (AST) and alanine transaminase (ALT). Our experimental results depict normalized fold changes of 1.62 and 1.31 for AST and ALT, respectively, illustrating up-regulations in their expression levels and hence validating their selection as critical genes of interest. In short, we illustrate the feasibility of multiplex gene expression analysis in an integrated LOC system as a viable POCT means for hepatotoxicity assessment.

摘要

一种真正实用的用于即时检测(POCT)肝毒性评估的芯片实验室(LOC)系统需要具备全自动化、易用性以及“样本进-结果出”的诊断能力。迄今为止,所报道的用于POCT肝毒性评估的微流控设备仍较为初级,因为它们大多仅具备半定量或单样本/基因检测能力。在本文中,我们首次描述了一种较为接近实用的POCT肝毒性评估设备的集成LOC系统——它兼具组织样本制备和多重实时逆转录聚合酶链反应(RT-PCR)功能。该系统具有半自动化、相对易用的特点,并且具备用于多重基因表达分析的“样本进-结果出”能力。我们的组织样本制备模块结合了微型匀浆器和表面处理的顺磁性微珠,可产生高纯度的mRNA提取物,比手动提取方法要好得多。我们的多重实时RT-PCR模块上的引物预加载表面处理程序和单加载入口简化了芯片外处理程序,便于使用。为了证明我们的LOC系统用于POCT肝毒性评估的有效性,我们进行了一项临床前动物研究,给予环磷酰胺,随后对肝功能测试的两个关键蛋白质生物标志物天冬氨酸转氨酶(AST)和丙氨酸转氨酶(ALT)进行基因表达分析。我们的实验结果显示,AST和ALT的标准化倍数变化分别为1.62和1.31,表明它们的表达水平上调,从而验证了它们作为关键感兴趣基因的选择。简而言之,我们证明了在集成LOC系统中进行多重基因表达分析作为一种可行的POCT手段用于肝毒性评估的可行性。

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