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韩国马口鱼(硬骨鱼纲,鲤形目,鲤科)的线粒体全基因组序列

The complete mitochondrial genome sequence of Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae).

作者信息

Eon Park Chang, Park Gun-Seok, Kwak Yunyoung, Kim Min-Chul, Kim Kgu-Hwan, Park Hee Cheon, Shin Jae-Ho

机构信息

a School of Applied Biosciences, Kyungpook National University , Daegu , Republic of Korea .

b Institute of Ornithology, Kyungpook National University , Daegu , Republic of Korea , and.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3723-4. doi: 10.3109/19401736.2015.1079875. Epub 2015 Sep 2.

Abstract

The short-barbel gudgeon Squalidus japonicus coreanus (Teleostei, Cypriniformes, Cyprinidae) is a subspecies of S. japonicus, and is endemic to Korea. The complete mitochondrial genome sequence consisted of 16 597 base pairs (bp) encoding 13 protein-coding genes (PCGs), two ribosomal RNAs (rRNAs), 22 transfer RNAs (tRNAs), and two non-coding regions. The overall base composition of S. japonicus coreanus was G + C: 47.4% and A + T: 52.6%, apparently with a slight AT bias. Phylogenetic analysis showed that S. japonicus coreanus was closely related to Pungtungia herzi.

摘要

短须颌须鮈朝鲜亚种(硬骨鱼纲,鲤形目,鲤科)是日本颌须鮈的一个亚种,为韩国特有种。其完整线粒体基因组序列由16597个碱基对(bp)组成,编码13个蛋白质编码基因(PCGs)、两个核糖体RNA(rRNAs)、22个转运RNA(tRNAs)和两个非编码区。朝鲜颌须鮈的总体碱基组成为G + C:47.4%,A + T:52.6%,明显有轻微的AT偏向。系统发育分析表明,朝鲜颌须鮈与赫氏斑条鳅关系密切。

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