Department of Microbiology, Immunology and Biopharmaceuticals, National Chiayi University, Chiayi City, Taiwan.
Department of Laboratory Medicine, Chang Gung Memorial Hospital, Linkou, Taoyuan, Taiwan.
Med Mycol. 2015 Nov;53(8):828-36. doi: 10.1093/mmy/myv065. Epub 2015 Sep 1.
Candida albicans is a common cause of bloodstream fungal infections in hospitalized patients. To investigate its epidemiology, multilocus sequence typing (MLST) was performed on 285 C. albicans bloodstream isolates from patients in Chang Gung Memorial Hospital at Linkou (CGMHL), Taiwan from 2003 to 2011. Among these isolates, the three major diploid sequence types (DSTs) were 693, 659, and 443 with 19, 16, and 13 isolates, respectively. The 179 DSTs were classified into 16 clades by unweighted pair-group method using arithmetic averages (UPGMA). The major ones were clades 1, 4, 3, and 17 (54, 49, 31, and 31 isolates, respectively). Further analyses with eBURST clustered the 285 isolates into 28 clonal complexes (CC). The most common complexes were CC8, CC20, and CC9. DST 693 that had the highest number of isolates was determined to be the cluster founder of CC20, which belonged to clade 3. So far, 33 isolates worldwide including 29 from Taiwan and 4 from Korea, are CC20, suggesting that CC20 is an Asian cluster. Two fluconazole-resistant isolates belonging to CC12 and CC19 were detected. All other CGMHL isolates were susceptible to 5-flucytosine, amphotericin B, anidulfungin, caspofungin, fluconazole, itraconazole, micafungin, posaconazole, and voriconazole. However, CC20 isolates exhibited significantly lower susceptibility to fluconazole. In conclusion, the 285 CGMHL C. albicans isolates displayed geographically clustering with Asian isolates, and most of them are susceptible to common antifungal drugs. Isolates of DST 693, a Taiwanese major genotype belonging to MLST clade 3, were more resistant to fluconazole than other isolates.
白色念珠菌是住院患者血流真菌感染的常见原因。为了研究其流行病学,我们对 2003 年至 2011 年来自中国台湾林口长庚纪念医院(CGMHL)的 285 株白色念珠菌血流分离株进行了多位点序列分型(MLST)。在这些分离株中,三个主要的二倍体序列型(DST)分别为 693、659 和 443,分别有 19、16 和 13 个分离株。179 个 DST 分为 16 个支系,采用非加权配对组平均法(UPGMA)进行聚类。主要支系为 1、4、3 和 17 支系(分别有 54、49、31 和 31 个分离株)。进一步的 eBURST 分析将 285 株分离株聚类为 28 个克隆复合体(CC)。最常见的复合体是 CC8、CC20 和 CC9。分离株数量最多的 DST693 被确定为 CC20 的聚类创始人,它属于 3 支系。迄今为止,全世界有 33 株分离株属于 CC20,包括来自台湾的 29 株和来自韩国的 4 株,表明 CC20 是一个亚洲克隆群。检测到两株属于 CC12 和 CC19 的氟康唑耐药分离株。CGMHL 的所有其他分离株对 5-氟胞嘧啶、两性霉素 B、安尼达fungin、卡泊芬净、氟康唑、伊曲康唑、米卡芬净、泊沙康唑和伏立康唑均敏感。然而,CC20 分离株对氟康唑的敏感性显著降低。总之,CGMHL 的 285 株白色念珠菌分离株在地理上与亚洲分离株聚集,且大多数对常见抗真菌药物敏感。属于 MLST 支系 3 的台湾主要基因型 DST693 的分离株对氟康唑的耐药性高于其他分离株。