Lorin Thibault, Salzburger Walter, Böhne Astrid
ENS (Ecole Normale Supérieure de Lyon), Lyon Cedex 07, France Zoological Institute, Department of Environmental Sciences, University of Basel, 4051 Basel, Switzerland.
Zoological Institute, Department of Environmental Sciences, University of Basel, 4051 Basel, Switzerland.
G3 (Bethesda). 2015 Sep 1;5(11):2275-83. doi: 10.1534/g3.115.020685.
The emergence of the steroid system is coupled to the evolution of multicellular animals. In vertebrates in particular, the steroid receptor repertoire has been shaped by genome duplications characteristic to this lineage. Here, we investigate for the first time the composition of the androgen receptor-signaling pathway in ray-finned fish genomes by focusing in particular on duplicates that emerged from the teleost-specific whole-genome duplication. We trace lineage- and species-specific duplications and gene losses for the genomic and nongenomic pathway of androgen signaling and subsequently investigate the sequence evolution of these genes. In one particular fish lineage, the cichlids, we find evidence for differing selection pressures acting on teleost-specific whole-genome duplication paralogs at a derived evolutionary stage. We then look into the expression of these duplicated genes in four cichlid species from Lake Tanganyika indicating, once more, rapid changes in expression patterns in closely related fish species. We focus on a particular case, the cichlid specific duplication of the rac1 GTPase, which shows possible signs of a neofunctionalization event.
类固醇系统的出现与多细胞动物的进化相关联。特别是在脊椎动物中,类固醇受体库是由该谱系特有的基因组复制所塑造的。在这里,我们首次通过特别关注硬骨鱼特异性全基因组复制产生的复制基因,研究了硬骨鱼基因组中雄激素受体信号通路的组成。我们追踪雄激素信号基因组和非基因组途径的谱系特异性和物种特异性复制及基因丢失情况,随后研究这些基因的序列进化。在一个特定的鱼类谱系——丽鱼科鱼类中,我们发现有证据表明在一个衍生的进化阶段,硬骨鱼特异性全基因组复制旁系同源基因受到不同的选择压力。然后,我们研究了这些复制基因在坦噶尼喀湖四种丽鱼科鱼类中的表达情况,再次表明密切相关的鱼类物种的表达模式发生了快速变化。我们聚焦于一个特定案例,即丽鱼科鱼类中rac1 GTP酶的特异性复制,它显示出可能的新功能化事件迹象。