用于通过核磁共振和电子顺磁共振光谱法对蛋白质进行长程距离测量的编码环镧系元素结合标签。
Encoded loop-lanthanide-binding tags for long-range distance measurements in proteins by NMR and EPR spectroscopy.
作者信息
Barthelmes Dominic, Gränz Markus, Barthelmes Katja, Allen Karen N, Imperiali Barbara, Prisner Thomas, Schwalbe Harald
机构信息
Institute of Organic Chemistry and Chemical Biology, Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, Max-von-Laue-Straße 7, 60438, Frankfurt Am Main, Germany.
Institute of Physical and Theoretical Chemistry, Center for Biomolecular Magnetic Resonance, Goethe University Frankfurt, Max-von-Laue-Straße 7, 60438, Frankfurt Am Main, Germany.
出版信息
J Biomol NMR. 2015 Nov;63(3):275-82. doi: 10.1007/s10858-015-9984-x. Epub 2015 Sep 4.
We recently engineered encodable lanthanide binding tags (LBTs) into proteins and demonstrated their applicability in Nuclear Magnetic Resonance (NMR) spectroscopy, X-ray crystallography and luminescence studies. Here, we engineered two-loop-LBTs into the model protein interleukin-1β (IL1β) and measured (1)H, (15)N-pseudocontact shifts (PCSs) by NMR spectroscopy. We determined the Δχ-tensors associated with each Tm(3+)-loaded loop-LBT and show that the experimental PCSs yield structural information at the interface between the two metal ion centers at atomic resolution. Such information is very valuable for the determination of the sites of interfaces in protein-protein-complexes. Combining the experimental PCSs of the two-loop-LBT construct IL1β-S2R2 and the respective single-loop-LBT constructs IL1β-S2, IL1β-R2 we additionally determined the distance between the metal ion centers. Further, we explore the use of two-loop LBTs loaded with Gd(3+) as a novel tool for distance determination by Electron Paramagnetic Resonance spectroscopy and show the NMR-derived distances to be remarkably consistent with distances derived from Pulsed Electron-Electron Dipolar Resonance.
我们最近将可编码的镧系元素结合标签(LBTs)设计到蛋白质中,并证明了它们在核磁共振(NMR)光谱、X射线晶体学和发光研究中的适用性。在这里,我们将双环LBTs设计到模型蛋白白细胞介素-1β(IL1β)中,并通过NMR光谱测量了(1)H、(15)N-伪接触位移(PCSs)。我们确定了与每个负载Tm(3+)的环LBT相关的Δχ张量,并表明实验性PCSs在原子分辨率下在两个金属离子中心之间的界面处产生结构信息。这些信息对于确定蛋白质-蛋白质复合物中的界面位点非常有价值。结合双环LBT构建体IL1β-S2R2以及各自的单环LBT构建体IL1β-S2、IL1β-R2的实验性PCSs,我们还确定了金属离子中心之间的距离。此外,我们探索了使用负载Gd(3+)的双环LBTs作为通过电子顺磁共振光谱进行距离测定的新型工具,并表明NMR得出的距离与脉冲电子-电子偶极共振得出的距离非常一致。