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通过RAPD和ISSR分析检测到的来自土耳其的丝石竹属(石竹科)物种的遗传多样性生物地理模式。

Biogeographic pattern of genetic diversity detected by RAPD and ISSR analysis in Gypsophila (Caryophyllaceae) species from Turkey.

作者信息

Korkmaz M, Dogan N Y

机构信息

Department of Biology, Faculty of Science and Arts, Erzincan University, Erzincan, Turkey.

Department of Biology, Faculty of Science and Arts, Erzincan University, Erzincan, Turkey

出版信息

Genet Mol Res. 2015 Aug 3;14(3):8829-38. doi: 10.4238/2015.August.3.6.

Abstract

Gypsophila L. is the 3rd-largest genus of Caryophyllaceae in Turkey, a country that includes 60 taxa belonging to 56 species of the 126 recognized in the genus. A total of 35 taxa are endemic to Turkey, with an approximately 60% endemism ratio. In this study, the genetic diversity of 14 Gypsophila species from Turkey was analyzed using random amplification of polymorphic DNA (RAPD) and inter-simple sequence repeat (ISSR) markers. Sixteen RAPD and 6 ISSR primers produced 132 polymorphic bands. RAPD, ISSR, and RAPD + ISSR primers for the 14 species showed 92.7, 93.8, and 92.9% polymorphism, respectively. Our results indicate that RAPD and ISSR markers are reliable and effective for assessing the genetic diversity of Gypsophila species. Gypsophila species studied were separated into 2 clusters. Our analysis shows that the clusters correlated with geographic and phytogeographic regions.

摘要

丝石竹属(Gypsophila L.)是土耳其石竹科中第三大属,在该国该属126个被认可的物种中有60个分类群属于56个物种。土耳其共有35个分类群为特有种,特有率约为60%。在本研究中,利用随机扩增多态性DNA(RAPD)和简单序列重复区间(ISSR)标记分析了来自土耳其的14种丝石竹属植物的遗传多样性。16条RAPD引物和6条ISSR引物产生了132条多态性条带。针对这14个物种的RAPD、ISSR以及RAPD + ISSR引物分别显示出92.7%、93.8%和92.9%的多态性。我们的结果表明,RAPD和ISSR标记对于评估丝石竹属植物的遗传多样性是可靠且有效的。所研究的丝石竹属植物被分为2个聚类。我们的分析表明,这些聚类与地理和植物地理区域相关。

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