Suppr超能文献

如何解决单离子通道中的微秒级电流波动:贝塔分布的作用。

How to resolve microsecond current fluctuations in single ion channels: the power of beta distributions.

作者信息

Schroeder Indra

机构信息

a Plant Membrane Biophysics, Technical University of Darmstadt ; Darmstadt , Germany.

出版信息

Channels (Austin). 2015;9(5):262-80. doi: 10.1080/19336950.2015.1083660.

Abstract

A main ingredient for the understanding of structure/function correlates of ion channels is the quantitative description of single-channel gating and conductance. However, a wealth of information provided from fast current fluctuations beyond the temporal resolution of the recording system is often ignored, even though it is close to the time window accessible to molecular dynamics simulations. This kind of current fluctuations provide a special technical challenge, because individual opening/closing or blocking/unblocking events cannot be resolved, and the resulting averaging over undetected events decreases the single-channel current. Here, I briefly summarize the history of fast-current fluctuation analysis and focus on the so-called "beta distributions." This tool exploits characteristics of current fluctuation-induced excess noise on the current amplitude histograms to reconstruct the true single-channel current and kinetic parameters. A guideline for the analysis and recent applications demonstrate that a construction of theoretical beta distributions by Markov Model simulations offers maximum flexibility as compared to analytical solutions.

摘要

理解离子通道结构/功能相关性的一个主要因素是对单通道门控和电导的定量描述。然而,尽管记录系统时间分辨率之外的快速电流波动所提供的大量信息接近分子动力学模拟可及的时间窗口,但这些信息常常被忽视。这类电流波动带来了特殊的技术挑战,因为无法分辨单个的开放/关闭或阻断/解除阻断事件,并且对未检测到的事件进行平均会降低单通道电流。在此,我简要总结快速电流波动分析的历史,并重点介绍所谓的“贝塔分布”。该工具利用电流波动在电流幅度直方图上引起的过量噪声的特征来重建真实的单通道电流和动力学参数。分析指南和近期应用表明,与解析解相比,通过马尔可夫模型模拟构建理论贝塔分布具有最大的灵活性。

相似文献

4
Principles of single-channel kinetic analysis.单通道动力学分析原理。
Methods Mol Biol. 2007;403:253-86. doi: 10.1007/978-1-59745-529-9_17.

引用本文的文献

2
Binding kinetics of quaternary ammonium ions in Kcv potassium channels.季铵离子在 Kcv 钾通道中的结合动力学。
Channels (Austin). 2024 Dec;18(1):2402749. doi: 10.1080/19336950.2024.2402749. Epub 2024 Oct 9.
7
Effects of ionic strength on gating and permeation of TREK-2 K2P channels.离子强度对 TREK-2 K2P 通道门控和通透的影响。
PLoS One. 2021 Oct 7;16(10):e0258275. doi: 10.1371/journal.pone.0258275. eCollection 2021.
10
Comparing Current Noise in Biological and Solid-State Nanopores.比较生物纳米孔和固态纳米孔中的电流噪声。
ACS Nano. 2020 Feb 25;14(2):1338-1349. doi: 10.1021/acsnano.9b09353. Epub 2020 Feb 17.

本文引用的文献

3
Membrane proteins, detergents and crystals: what is the state of the art?膜蛋白、去污剂与晶体:当前的技术水平如何?
Acta Crystallogr F Struct Biol Commun. 2014 Dec 1;70(Pt 12):1576-83. doi: 10.1107/S2053230X14025035. Epub 2014 Nov 28.
7
Modeling ion channels: past, present, and future.离子通道建模:过去、现在与未来。
J Gen Physiol. 2014 Jul;144(1):7-26. doi: 10.1085/jgp.201311130. Epub 2014 Jun 16.
9
Potassium channels in cell cycle and cell proliferation.细胞周期与细胞增殖中的钾通道
Philos Trans R Soc Lond B Biol Sci. 2014 Feb 3;369(1638):20130094. doi: 10.1098/rstb.2013.0094. Print 2014 Mar 19.
10

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验