O'Brien Darragh P, Hernandez Belen, Durand Dominique, Hourdel Véronique, Sotomayor-Pérez Ana-Cristina, Vachette Patrice, Ghomi Mahmoud, Chamot-Rooke Julia, Ladant Daniel, Brier Sébastien, Chenal Alexandre
Institut Pasteur, UMR CNRS 3528, Chemistry and Structural Biology Department, 75724 PARIS cedex 15, France.
Sorbonne Paris Cité, Université Paris 13, Groupe de Biophysique Moléculaire, UFR Santé-Médecine-Biologie Humaine, 74 rue Marcel Cachin, 93017 Bobigny Cedex, France.
Sci Rep. 2015 Sep 16;5:14223. doi: 10.1038/srep14223.
Many Gram-negative bacteria use Type I secretion systems, T1SS, to secrete virulence factors that contain calcium-binding Repeat-in-ToXin (RTX) motifs. Here, we present structural models of an RTX protein, RD, in both its intrinsically disordered calcium-free Apo-state and its folded calcium-bound Holo-state. Apo-RD behaves as a disordered polymer chain comprising several statistical elements that exhibit local rigidity with residual secondary structure. Holo-RD is a folded multi-domain protein with an anisometric shape. RTX motifs thus appear remarkably adapted to the structural and mechanistic constraints of the secretion process. In the low calcium environment of the bacterial cytosol, Apo-RD is an elongated disordered coil appropriately sized for transport through the narrow secretion machinery. The progressive folding of Holo-RD in the extracellular calcium-rich environment as it emerges form the T1SS may then favor its unidirectional export through the secretory channel. This process is relevant for hundreds of bacterial species producing virulent RTX proteins.
许多革兰氏阴性菌利用I型分泌系统(T1SS)来分泌含有钙结合重复毒素(RTX)基序的毒力因子。在此,我们展示了一种RTX蛋白RD在其无钙的内在无序Apo状态和折叠的钙结合Holo状态下的结构模型。Apo-RD表现为一种无序的聚合物链,包含几个具有局部刚性且带有残余二级结构的统计元件。Holo-RD是一种折叠的多结构域蛋白,形状呈不等轴状。因此,RTX基序似乎非常适应分泌过程的结构和机制限制。在细菌细胞质的低钙环境中,Apo-RD是一个细长的无序螺旋,其大小适合通过狭窄的分泌机制进行运输。当Holo-RD从T1SS中出现时,在细胞外富含钙的环境中逐渐折叠,这可能有利于其通过分泌通道进行单向输出。这一过程与数百种产生有毒RTX蛋白的细菌物种相关。