Huang Kecheng, Luo Aiyue, Li Xiong, Li Shuang, Wang Shixuan
Department of Gynecology & Obstetrics, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology Wuhan 430030, Hubei, China.
Int J Clin Exp Med. 2015 Jul 15;8(7):10835-44. eCollection 2015.
An artificial neuron network (ANN) model combining both the genetic risk factors and clinical factorsmay be effective in prediction of chemotherapy-induced adverse events.
To identify genetic factors and clinical factors associated with bone marrow suppression in cervical cancer patient, and to build a model for chemotherapy-induced neutropenia prediction.
We performed a genome wide association study on a cohort to identify genetic determinants. Samples were genotyped using the Axiom CHB 1.0. The primary analyses focused on the scan of 657178 single-nucleotide polymorphisms (SNPs). Artificial neural network were used to integrating clinical factors and genetic factors to predict the occurrence of neutropenia.
32 variants associated with neutropenia in the patients after chemotherapy were found (P<1 × 10(-4)). During internal validation and external validation, artificial neural network performed well in predicting neutropenia with considerable accuracy, which is 88.9% and 81.7% respectively. ROC analysis had acceptable areas under the curve of 0.897 for the internal validation sample and 0.782 for the external validation sample.
Neutropenia may be associated with both genetic factors and clinical factors. Our study found that the artificial neural networks model based on the multiple risk factors jointly, can effectively predict the occurring of neutropenia, which provides some guidance before the starting of chemotherapy.
结合遗传风险因素和临床因素的人工神经网络(ANN)模型可能在预测化疗引起的不良事件方面有效。
识别宫颈癌患者中与骨髓抑制相关的遗传因素和临床因素,并建立化疗引起的中性粒细胞减少症预测模型。
我们对一个队列进行了全基因组关联研究以识别遗传决定因素。使用Axiom CHB 1.0对样本进行基因分型。主要分析集中在对657178个单核苷酸多态性(SNP)的扫描。使用人工神经网络整合临床因素和遗传因素来预测中性粒细胞减少症的发生。
发现32个与化疗后患者中性粒细胞减少症相关的变异(P<1×10⁻⁴)。在内部验证和外部验证期间,人工神经网络在预测中性粒细胞减少症方面表现良好,准确率分别为88.9%和81.7%。内部验证样本的ROC分析曲线下面积为0.897,外部验证样本为0.782,均可接受。
中性粒细胞减少症可能与遗传因素和临床因素均有关。我们的研究发现,基于多种风险因素联合的人工神经网络模型可以有效预测中性粒细胞减少症的发生,这在化疗开始前提供了一些指导。