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用磷酸吡哆醛修饰红螺菌核酮糖二磷酸羧化酶。1. 活性位点处赖氨酸残基的鉴定。

Modification of Rhodospirillum rubrum ribulose bisphosphate carboxylase with pyridoxal phosphate. 1. Identification of a lysyl residue at the active site.

作者信息

Whitman W B, Tabita F R

出版信息

Biochemistry. 1978 Apr 4;17(7):1282-7. doi: 10.1021/bi00600a023.

DOI:10.1021/bi00600a023
PMID:26381
Abstract

Ribulose 1,5-bisphosphate carboxylase isolated from Rhodospirillum rubrum was strongly inhibited by low concentrations of pyridoxal 5'-phosphate. Activity was protected by the substrate ribulose bisphosphate and to a lesser extent by other phosphorylated compounds. Pyridoxal phosphate inhibition was enhanced in the presence of magnesium and bicarbonate, but not in the presence of either compound alone. Concomitant with inhibition of enzyme activity, pyridoxal phosphate forms a Schiff base with the enzyme which is reversible upon dialysis and reducible with sodium borohydride. Subsequent to reduction of the Schiff base with tritiated sodium borohydride, tritiated N6-pyridoxyllysine could be identified in the acid hydrolysate of the enzyme. Only small amounts of this compound were present when the reduction was performed in the presence of carboxyribitol bisphosphate, an analogue of the intermediate formed during the carboxylation reaction. Therefore, it is concluded that pyridoxal phosphate modifies a lysyl residue close to or at the active site of ribulose bisphosphate carboxylase.

摘要

从深红红螺菌中分离出的1,5-二磷酸核酮糖羧化酶受到低浓度的5'-磷酸吡哆醛的强烈抑制。底物二磷酸核酮糖可保护该酶的活性,其他磷酸化化合物在较小程度上也有保护作用。在镁离子和碳酸氢根存在时,磷酸吡哆醛的抑制作用增强,但单独存在这两种化合物时则不会。伴随着酶活性的抑制,磷酸吡哆醛与该酶形成席夫碱,经透析后该席夫碱可逆,且能用硼氢化钠还原。用氚化硼氢化钠还原席夫碱后,在该酶的酸水解产物中可鉴定出氚化的N6-吡啶基赖氨酸。当在羧基核糖醇二磷酸(羧化反应过程中形成的中间体类似物)存在下进行还原时,仅存在少量这种化合物。因此,可以得出结论,磷酸吡哆醛修饰了靠近或位于二磷酸核酮糖羧化酶活性位点的赖氨酸残基。

相似文献

1
Modification of Rhodospirillum rubrum ribulose bisphosphate carboxylase with pyridoxal phosphate. 1. Identification of a lysyl residue at the active site.用磷酸吡哆醛修饰红螺菌核酮糖二磷酸羧化酶。1. 活性位点处赖氨酸残基的鉴定。
Biochemistry. 1978 Apr 4;17(7):1282-7. doi: 10.1021/bi00600a023.
2
Modification of Rhodospirillum rubrum ribulose bisphosphate carboxylase with pyridoxal phosphate. 2. Stoichiometry and kinetics of inactivation.用磷酸吡哆醛修饰深红红螺菌核酮糖二磷酸羧化酶。2. 失活的化学计量和动力学
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Isolation and sequence of the pyridoxal 5'-phosphate active-site peptide from Rhodospirillum rubrum ribulose-1,5-bisphosphate carboxylase/oxygenase.来自红螺菌核糖-1,5-二磷酸羧化酶/加氧酶的磷酸吡哆醛5'-磷酸活性位点肽的分离与测序
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Activation and regulation of ribulose bisphosphate carboxylase-oxygenase in the absence of small subunits.在缺乏小亚基的情况下核酮糖二磷酸羧化酶-加氧酶的激活与调控
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Competition of pyridoxal 5'-phosphate with ribulose 1,5-bisphosphate and effector sugar phosphates at the reaction centers of the spinach ribulose 1,5-bisphosphate carboxylase/oxygenase.菠菜1,5-二磷酸核酮糖羧化酶/加氧酶反应中心处5'-磷酸吡哆醛与1,5-二磷酸核酮糖及效应糖磷酸酯的竞争
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Active site studies of ribulose-1,5-bisphosphate carboxylase/oxygenase with pyridoxal 5'-phosphate.利用磷酸吡哆醛对1,5-二磷酸核酮糖羧化酶/加氧酶的活性位点研究
J Biol Chem. 1978 Nov 10;253(21):7864-73.
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Ribulose 1,5-bisphosphate carboxylase. Effect on the catalytic properties of changing methionine-330 to leucine in the Rhodospirillum rubrum enzyme.核酮糖-1,5-二磷酸羧化酶。红球藻中蛋氨酸-330变为亮氨酸对该酶催化特性的影响。
Biochem J. 1986 May 1;235(3):839-46. doi: 10.1042/bj2350839.
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Pyridoxal phosphate as a probe in the active site of ribulose bisphosphate carboxylase/oxygenase.磷酸吡哆醛作为核酮糖二磷酸羧化酶/加氧酶活性位点的探针
Arch Biochem Biophys. 1983 Jun;223(2):610-7. doi: 10.1016/0003-9861(83)90625-2.
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2-Bromoacetylaminopentitol 1,5-bisphosphate as an affinity label for ribulose bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum.2-溴乙酰氨基戊糖醇1,5-二磷酸作为来自红螺菌的核酮糖二磷酸羧化酶/加氧酶的亲和标记物。
J Biol Chem. 1982 Apr 10;257(7):3501-5.

引用本文的文献

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Plant Physiol. 1981 Jul;68(1):252-5. doi: 10.1104/pp.68.1.252.
2
C nuclear magnetic resonance study of the CO(2) activation of ribulosebisphosphate carboxylase from Rhodospirillum rubrum.红螺菌中核酮糖二磷酸羧化酶二氧化碳活化的C核磁共振研究。
Proc Natl Acad Sci U S A. 1979 Feb;76(2):673-5. doi: 10.1073/pnas.76.2.673.
3
Research on Carbon Dioxide Fixation in Photosynthetic Microorganisms (1971-present).
光合微生物中二氧化碳固定的研究(1971年至今)。
Photosynth Res. 2004;80(1-3):315-32. doi: 10.1023/B:PRES.0000030455.46192.47.
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Isolation, characterization, and crystallization of ribulosebisphosphate carboxylase from autotrophically grown Rhodospirillum rubrum.从自养生长的深红红螺菌中分离、鉴定和结晶核酮糖二磷酸羧化酶。
J Bacteriol. 1979 Jan;137(1):490-501. doi: 10.1128/jb.137.1.490-501.1979.