Márquez-Miranda Valeria, Camarada María Belén, Araya-Durán Ingrid, Varas-Concha Ignacio, Almonacid Daniel Eduardo, González-Nilo Fernando Danilo
Universidad Andres Bello, Facultad de Biología, Center for Bioinformatics and Integrative Biology (CBIB), Santiago, Chile; Fundación Fraunhofer Chile Research, Las Condes, Chile.
Universidad Bernardo O Higgins, Laboratorio de Bionanotecnología, Santiago, Chile.
PLoS One. 2015 Sep 18;10(9):e0138392. doi: 10.1371/journal.pone.0138392. eCollection 2015.
Biomimetics, or the use of principles of Nature for developing new materials, is a paradigm that could help Nanomedicine tremendously. One of the current challenges in Nanomedicine is the rational design of new efficient and safer gene carriers. Poly(amidoamine) (PAMAM) dendrimers are a well-known class of nanoparticles, extensively used as non-viral nucleic acid carriers, due to their positively charged end-groups. Yet, there are still several aspects that can be improved for their successful application in in vitro and in vivo systems, including their affinity for nucleic acids as well as lowering their cytotoxicity. In the search of new functional groups that could be used as new dendrimer-reactive groups, we followed a biomimetic approach to determine the amino acids with highest prevalence in protein-DNA interactions. Then we introduced them individually as terminal groups of dendrimers, generating a new class of nanoparticles. Molecular dynamics studies of two systems: PAMAM-Arg and PAMAM-Lys were also performed in order to describe the formation of complexes with DNA. Results confirmed that the introduction of amino acids as terminal groups in a dendrimer increases their affinity for DNA and the interactions in the complexes were characterized at atomic level. We end up by briefly discussing additional modifications that can be made to PAMAM dendrimers to turned them into promising new gene carriers.
仿生学,即利用自然原理开发新材料,是一种能极大助力纳米医学的范例。纳米医学当前面临的挑战之一是合理设计新型高效且更安全的基因载体。聚(酰胺胺)(PAMAM)树枝状大分子是一类知名的纳米颗粒,因其带正电荷的端基而被广泛用作非病毒核酸载体。然而,要使其在体外和体内系统中成功应用,仍有几个方面需要改进,包括它们对核酸的亲和力以及降低其细胞毒性。在寻找可作为新型树枝状大分子反应基团的新官能团时,我们采用了一种仿生方法来确定在蛋白质 - DNA 相互作用中出现频率最高的氨基酸。然后我们将它们分别作为树枝状大分子的端基引入,生成了一类新型纳米颗粒。还对两个系统:PAMAM - Arg 和 PAMAM - Lys 进行了分子动力学研究,以描述与 DNA 形成复合物的过程。结果证实,在树枝状大分子中引入氨基酸作为端基会增加它们对 DNA 的亲和力,并且在原子水平上对复合物中的相互作用进行了表征。最后,我们简要讨论了对 PAMAM 树枝状大分子可以进行的其他修饰,以便将它们转变为有前景的新型基因载体。
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