文献检索文档翻译深度研究
Suppr Zotero 插件Zotero 插件
邀请有礼套餐&价格历史记录

新学期,新优惠

限时优惠:9月1日-9月22日

30天高级会员仅需29元

1天体验卡首发特惠仅需5.99元

了解详情
不再提醒
插件&应用
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
高级版
套餐订阅购买积分包
AI 工具
文献检索文档翻译深度研究
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2025

仿生学:从生物信息学到作为基因载体的树枝状大分子的合理设计。

Biomimetics: From Bioinformatics to Rational Design of Dendrimers as Gene Carriers.

作者信息

Márquez-Miranda Valeria, Camarada María Belén, Araya-Durán Ingrid, Varas-Concha Ignacio, Almonacid Daniel Eduardo, González-Nilo Fernando Danilo

机构信息

Universidad Andres Bello, Facultad de Biología, Center for Bioinformatics and Integrative Biology (CBIB), Santiago, Chile; Fundación Fraunhofer Chile Research, Las Condes, Chile.

Universidad Bernardo O Higgins, Laboratorio de Bionanotecnología, Santiago, Chile.

出版信息

PLoS One. 2015 Sep 18;10(9):e0138392. doi: 10.1371/journal.pone.0138392. eCollection 2015.


DOI:10.1371/journal.pone.0138392
PMID:26382062
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4575034/
Abstract

Biomimetics, or the use of principles of Nature for developing new materials, is a paradigm that could help Nanomedicine tremendously. One of the current challenges in Nanomedicine is the rational design of new efficient and safer gene carriers. Poly(amidoamine) (PAMAM) dendrimers are a well-known class of nanoparticles, extensively used as non-viral nucleic acid carriers, due to their positively charged end-groups. Yet, there are still several aspects that can be improved for their successful application in in vitro and in vivo systems, including their affinity for nucleic acids as well as lowering their cytotoxicity. In the search of new functional groups that could be used as new dendrimer-reactive groups, we followed a biomimetic approach to determine the amino acids with highest prevalence in protein-DNA interactions. Then we introduced them individually as terminal groups of dendrimers, generating a new class of nanoparticles. Molecular dynamics studies of two systems: PAMAM-Arg and PAMAM-Lys were also performed in order to describe the formation of complexes with DNA. Results confirmed that the introduction of amino acids as terminal groups in a dendrimer increases their affinity for DNA and the interactions in the complexes were characterized at atomic level. We end up by briefly discussing additional modifications that can be made to PAMAM dendrimers to turned them into promising new gene carriers.

摘要

仿生学,即利用自然原理开发新材料,是一种能极大助力纳米医学的范例。纳米医学当前面临的挑战之一是合理设计新型高效且更安全的基因载体。聚(酰胺胺)(PAMAM)树枝状大分子是一类知名的纳米颗粒,因其带正电荷的端基而被广泛用作非病毒核酸载体。然而,要使其在体外和体内系统中成功应用,仍有几个方面需要改进,包括它们对核酸的亲和力以及降低其细胞毒性。在寻找可作为新型树枝状大分子反应基团的新官能团时,我们采用了一种仿生方法来确定在蛋白质 - DNA 相互作用中出现频率最高的氨基酸。然后我们将它们分别作为树枝状大分子的端基引入,生成了一类新型纳米颗粒。还对两个系统:PAMAM - Arg 和 PAMAM - Lys 进行了分子动力学研究,以描述与 DNA 形成复合物的过程。结果证实,在树枝状大分子中引入氨基酸作为端基会增加它们对 DNA 的亲和力,并且在原子水平上对复合物中的相互作用进行了表征。最后,我们简要讨论了对 PAMAM 树枝状大分子可以进行的其他修饰,以便将它们转变为有前景的新型基因载体。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/b87685d52b01/pone.0138392.g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/ced4a339dfa8/pone.0138392.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/4a7638e16572/pone.0138392.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/3f24b7274865/pone.0138392.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/20ac6b81b1e2/pone.0138392.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/df856a4e7eb6/pone.0138392.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/72da3032823c/pone.0138392.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/0e09eb0a313c/pone.0138392.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/aa25559d8af8/pone.0138392.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/7400e6ad268c/pone.0138392.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/b87685d52b01/pone.0138392.g010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/ced4a339dfa8/pone.0138392.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/4a7638e16572/pone.0138392.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/3f24b7274865/pone.0138392.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/20ac6b81b1e2/pone.0138392.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/df856a4e7eb6/pone.0138392.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/72da3032823c/pone.0138392.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/0e09eb0a313c/pone.0138392.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/aa25559d8af8/pone.0138392.g008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/7400e6ad268c/pone.0138392.g009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eaf9/4575034/b87685d52b01/pone.0138392.g010.jpg

相似文献

[1]
Biomimetics: From Bioinformatics to Rational Design of Dendrimers as Gene Carriers.

PLoS One. 2015-9-18

[2]
Poly(amidoamine) dendrimer complexes as a platform for gene delivery.

Expert Opin Drug Deliv. 2013-10-30

[3]
Multiscale Molecular Simulations Applied to Nucleic Acid-Dendrimer Interactions Studies.

Curr Pharm Des. 2017-8-30

[4]
Atomic level insights into realistic molecular models of dendrimer-drug complexes through MD simulations.

J Chem Phys. 2016-9-28

[5]
Gene delivery into mesenchymal stem cells: a biomimetic approach using RGD nanoclusters based on poly(amidoamine) dendrimers.

Biomacromolecules. 2011-1-6

[6]
Recent Advances in Preclinical Research Using PAMAM Dendrimers for Cancer Gene Therapy.

Int J Mol Sci. 2021-3-13

[7]
PEGylated PAMAM dendrimers: Enhancing efficacy and mitigating toxicity for effective anticancer drug and gene delivery.

Acta Biomater. 2016-10-1

[8]
PAMAM dendrimer as a talented multifunctional biomimetic nanocarrier for cancer diagnosis and therapy.

Colloids Surf B Biointerfaces. 2021-8

[9]
Disulfide cross-linked low generation dendrimers with high gene transfection efficacy, low cytotoxicity, and low cost.

J Am Chem Soc. 2012-10-10

[10]
A novel dendrimer based on poly (L-glutamic acid) derivatives as an efficient and biocompatible gene delivery vector.

Nanotechnology. 2011-8-19

引用本文的文献

[1]
From Structure to Function: The Promise of PAMAM Dendrimers in Biomedical Applications.

Pharmaceutics. 2025-7-18

[2]
Nanodelivery Systems Targeting Epidermal Growth Factor Receptors for Glioma Management.

Pharmaceutics. 2020-12-10

[3]
The complex of PAMAM-OH dendrimer with Angiotensin (1-7) prevented the disuse-induced skeletal muscle atrophy in mice.

Int J Nanomedicine. 2017-3-13

[4]
Self-Assembly of Amphiphilic Dendrimers: The Role of Generation and Alkyl Chain Length in siRNA Interaction.

Sci Rep. 2016-7-5

[5]
Effect of Terminal Groups of Dendrimers in the Complexation with Antisense Oligonucleotides and Cell Uptake.

Nanoscale Res Lett. 2016-12

本文引用的文献

[1]
Free Energy Calculations by the Molecular Mechanics Poisson-Boltzmann Surface Area Method.

Mol Inform. 2012-2

[2]
Synergistic effect of amino acids modified on dendrimer surface in gene delivery.

Biomaterials. 2014-8-8

[3]
Arginine-terminated generation 4 PAMAM dendrimer as an effective nanovector for functional siRNA delivery in vitro and in vivo.

Bioconjug Chem. 2014-3-19

[4]
Dendrimers for siRNA Delivery.

Pharmaceuticals (Basel). 2013-2-4

[5]
Computationally efficient methodology for atomic-level characterization of dendrimer-drug complexes: a comparison of amine- and acetyl-terminated PAMAM.

J Phys Chem B. 2013-5-22

[6]
Comparative anti-inflammatory activity of poly(amidoamine) (PAMAM) dendrimer-dexamethasone conjugates with dexamethasone-liposomes.

Int J Pharm. 2013-4-9

[7]
Study of interaction energies between the PAMAM dendrimer and nonsteroidal anti-inflammatory drug using a distributed computational strategy and experimental analysis by ESI-MS/MS.

J Phys Chem B. 2012-2-10

[8]
Poly(amidoamine)-based dendrimer/siRNA complexation studied by computer simulations: effects of pH and generation on dendrimer structure and siRNA binding.

Macromol Biosci. 2011-12-6

[9]
Synthesis of PAMAM dendrimer derivatives with enhanced buffering capacity and remarkable gene transfection efficiency.

Bioconjug Chem. 2011-5-12

[10]
DNA compaction by a dendrimer.

J Phys Chem B. 2010-12-20

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

推荐工具

医学文档翻译智能文献检索