Zhou Wugang, Zhang Ke, Chen Dongrui, Gao Pingjin, Wang Qiao
Emergency Department, Shanghai Ninth People's Hospital, Shanghai Jiaotong University School of Medicine, Shanghai 200011, P.R. China.
Department of Hypertension, Ruijin Hospital, Shanghai Key Lab of Hypertension, Shanghai Institute of Hypertension, Shanghai Jiaotong University School of Medicine, Shanghai 200025, P.R. China.
Mol Med Rep. 2015 Nov;12(5):7358-66. doi: 10.3892/mmr.2015.4349. Epub 2015 Sep 22.
Venous thromboembolism is a major cause of morbidity and mortality with a high recurrence rate. The present study aimed to explore the molecular mechanisms and potential biomarkers of single venous thromboembolism (SVTE) and recurrent venous thromboembolism (RVTE). The microarray dataset GSE19151 was downloaded from Gene Expression Omnibus, which contained data from whole blood samples from 63 healthy controls, 32 SVTE and 38 RVTE patients. Differentially expressed genes (DEGs) in the SVTE and RVTE groups compared with those in the controls were identified using the t‑test, followed by clustering analysis of DEGs and samples. Functional and pathway enrichment analyses were performed for DEGs in patients with RVTE and SVTE, as well as specific DEGs in patients with RVTE. The identified 42 DEGs in RVTE were mainly enriched in biological processes of cellular protein metabolism, gene expression and translational elongation as well as in pathways associated with ribosomes, Parkinson's disease and oxidative phosphorylation. In SVTE, 20 DEGs were identified, which were mainly involved in biological processes of biopolymer biosynthesis, translational elongation and cellular protein metabolism as well as pathways associated with ribosomes and cardiac muscle contraction. In RVTE, 22 specific DEGs were mainly involved in translational elongation, negative regulation of the force of heart contraction by chemical signals, cell proliferation, ribosomal pathways and protein export. The identified DEGs of SVTE, including COX7C and UQCRQ, may be potential biomarkers for SVTE, and the specific DEGs of RVTE, including ADRBK1, NDUFA5 and ATP5O, may be potential biomarkers for RVTE.
静脉血栓栓塞是发病率和死亡率的主要原因,且复发率很高。本研究旨在探讨单次静脉血栓栓塞(SVTE)和复发性静脉血栓栓塞(RVTE)的分子机制和潜在生物标志物。从基因表达综合数据库下载了微阵列数据集GSE19151,其中包含来自63名健康对照、32名SVTE患者和38名RVTE患者全血样本的数据。使用t检验确定SVTE组和RVTE组与对照组相比的差异表达基因(DEG),随后对DEG和样本进行聚类分析。对RVTE和SVTE患者的DEG以及RVTE患者的特定DEG进行功能和通路富集分析。在RVTE中鉴定出的42个DEG主要富集在细胞蛋白质代谢、基因表达和翻译延伸的生物学过程以及与核糖体、帕金森病和氧化磷酸化相关的通路中。在SVTE中,鉴定出20个DEG,主要参与生物聚合物生物合成、翻译延伸和细胞蛋白质代谢的生物学过程以及与核糖体和心肌收缩相关的通路。在RVTE中,22个特定DEG主要参与翻译延伸、化学信号对心脏收缩力的负调控、细胞增殖、核糖体通路和蛋白质输出。鉴定出的SVTE的DEG,包括COX7C和UQCRQ,可能是SVTE的潜在生物标志物,而RVTE的特定DEG,包括ADRBK1、NDUFA5和ATP5O,可能是RVTE的潜在生物标志物。