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国家肺部基质试验:将晚期非小细胞肺癌分层生物学转化应用

The National Lung Matrix Trial: translating the biology of stratification in advanced non-small-cell lung cancer.

作者信息

Middleton G, Crack L R, Popat S, Swanton C, Hollingsworth S J, Buller R, Walker I, Carr T H, Wherton D, Billingham L J

机构信息

Institute of Immunology and Immunotherapy, University of Birmingham, Birmingham Department of Oncology, University Hospitals Birmingham NHS Foundation Trust, Birmingham

Cancer Research UK Clinical Trials Unit, University of Birmingham, Birmingham.

出版信息

Ann Oncol. 2015 Dec;26(12):2464-9. doi: 10.1093/annonc/mdv394. Epub 2015 Sep 25.

Abstract

BACKGROUND

The management of NSCLC has been transformed by stratified medicine. The National Lung Matrix Trial (NLMT) is a UK-wide study exploring the activity of rationally selected biomarker/targeted therapy combinations.

PATIENTS AND METHODS

The Cancer Research UK (CRUK) Stratified Medicine Programme 2 is undertaking the large volume national molecular pre-screening which integrates with the NLMT. At study initiation, there are eight drugs being used to target 18 molecular cohorts. The aim is to determine whether there is sufficient signal of activity in any drug-biomarker combination to warrant further investigation. A Bayesian adaptive design that gives a more realistic approach to decision making and flexibility to make conclusions without fixing the sample size was chosen. The screening platform is an adaptable 28-gene Nextera next-generation sequencing platform designed by Illumina, covering the range of molecular abnormalities being targeted. The adaptive design allows new biomarker-drug combination cohorts to be incorporated by substantial amendment. The pre-clinical justification for each biomarker-drug combination has been rigorously assessed creating molecular exclusion rules and a trumping strategy in patients harbouring concomitant actionable genetic abnormalities. Discrete routes of pathway activation or inactivation determined by cancer genome aberrations are treated as separate cohorts. Key translational analyses include the deep genomic analysis of pre- and post-treatment biopsies, the establishment of patient-derived xenograft models and longitudinal ctDNA collection, in order to define predictive biomarkers, mechanisms of resistance and early markers of response and relapse.

CONCLUSION

The SMP2 platform will provide large scale genetic screening to inform entry into the NLMT, a trial explicitly aimed at discovering novel actionable cohorts in NSCLC.

CLINICAL TRIAL ISRCTN

摘要

背景

分层医学改变了非小细胞肺癌(NSCLC)的治疗方式。英国国家肺部矩阵试验(NLMT)是一项在全英国范围内开展的研究,旨在探索合理选择的生物标志物/靶向治疗组合的活性。

患者与方法

英国癌症研究(CRUK)分层医学计划2正在进行大规模的全国性分子预筛查,并与NLMT相结合。在研究启动时,有8种药物用于针对18个分子队列。目的是确定在任何药物-生物标志物组合中是否有足够的活性信号以保证进一步研究。选择了一种贝叶斯适应性设计,该设计为决策提供了更现实的方法,并在不固定样本量的情况下具有得出结论的灵活性。筛查平台是由Illumina设计的适应性强的28基因Nextera下一代测序平台,涵盖了所针对的分子异常范围。适应性设计允许通过重大修正纳入新的生物标志物-药物组合队列。对每种生物标志物-药物组合的临床前依据进行了严格评估,制定了分子排除规则以及针对伴有可操作遗传异常患者的优先策略。由癌症基因组畸变确定的离散的通路激活或失活途径被视为单独的队列。关键的转化分析包括治疗前和治疗后活检的深度基因组分析、患者来源异种移植模型的建立以及纵向循环肿瘤DNA(ctDNA)收集,以确定预测性生物标志物、耐药机制以及反应和复发的早期标志物。

结论

SMP2平台将提供大规模基因筛查,为进入NLMT提供信息,NLMT是一项明确旨在发现NSCLC中新的可操作队列的试验。

临床试验国际标准随机对照试验编号

38344105。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/eb88/4658545/b6bdb17ff154/mdv39401.jpg

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