Shang Cheng, Philpott Julian M, Bampos Nick, Barker Paul D, Wales David J
University Chemical Laboratories, Lensfield Road, Cambridge CB2 1EW, UK.
Phys Chem Chem Phys. 2015 Oct 28;17(40):27094-102. doi: 10.1039/c5cp04636j. Epub 2015 Sep 28.
We present the first predictions of meso-aryl flipping pathways in porphyrin oligomers. In the context of cyclic oligoporphyrins this flipping results in a paddle rotation of each porphyrin monomer in the oligomeric ring. If the monomer porphyrin units are asymmetric, this flipping will have consequences for their supramolecular behaviour. Desymmetrisation of synthetic porphyrins leads to synthetic challenges, and hence these species are not as well studied as the more accessible, symmetric counterparts. We have both simulated and synthesized novel, desymmetrised monomeric and cyclic trimeric porphyrins and we predict that the flipping barrier for a porphyrin monomer within the trimer is 36.7 kJ mol(-1) higher than that for meso-aryl flipping in the monomer. The flipping rates estimated from Variable temperature NMR data are consistent with these results. We have also carried out a systematic investigation of how porphyrinic substituents will affect the dynamics, revealing that adding steric bulk in the right place can facilitate meso-aryl flipping. While supramolecular chemistry often focuses on highly symmetric assemblies, evolution can break molecular symmetry in subtle ways, leading to many pseudosymmetric assemblies in biology, especially protein-porphyrinic complexes that are important for energy harvesting and electron transport systems. The dynamic behaviour we have characterized can be critical for the design and function of these molecules, and hence our results will help inform future efforts in the synthesis of asymmetric porphyrinic assemblies that interact with biomolecules.
我们展示了卟啉低聚物中中芳基翻转途径的首次预测。在环状低聚卟啉的背景下,这种翻转导致低聚环中每个卟啉单体的桨式旋转。如果单体卟啉单元是不对称的,这种翻转将对其超分子行为产生影响。合成卟啉的去对称化带来了合成挑战,因此这些物种的研究不如更容易获得的对称对应物深入。我们已经模拟并合成了新型的、去对称化的单体和环状三聚卟啉,并且我们预测三聚体中卟啉单体的翻转势垒比单体中中芳基翻转的势垒高36.7 kJ mol(-1)。根据变温核磁共振数据估计的翻转速率与这些结果一致。我们还对卟啉取代基如何影响动力学进行了系统研究,结果表明在合适的位置增加空间位阻可以促进中芳基翻转。虽然超分子化学通常关注高度对称的组装体,但进化可以以微妙的方式打破分子对称性,导致生物学中出现许多准对称组装体,特别是对于能量收集和电子传输系统很重要的蛋白质 - 卟啉复合物。我们所表征的动态行为对于这些分子的设计和功能可能至关重要,因此我们的结果将有助于为未来合成与生物分子相互作用的不对称卟啉组装体的努力提供信息。