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不同环境中三价铁细胞色素c的超快血红素动力学:电子、振动和构象弛豫

Ultrafast Heme Dynamics of Ferric Cytochrome c in Different Environments: Electronic, Vibrational, and Conformational Relaxation.

作者信息

Karunakaran Venugopal

机构信息

Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram, 695 019, Kerala, India.

Academy of Scientific and Innovative Research (AcSIR), New Delhi, 110 001, India.

出版信息

Chemphyschem. 2015 Dec 21;16(18):3974-83. doi: 10.1002/cphc.201500672. Epub 2015 Oct 22.

Abstract

The excited-state dynamics of ferric cytochrome c (Cyt c), an important electron-transfer heme protein, in acidic to alkaline medium and in its unfolded form are investigated by using femtosecond pump-probe spectroscopy, exciting the heme and Tryptophan (Trp) to understand the electronic, vibrational, and conformational relaxation of the heme. At 390 nm excitation, the electronic relaxation of heme is found to be ≈150 fs at different pH values, increasing to 480 fs in the unfolded form. Multistep vibrational relaxation dynamics of the heme, including fast and slow processes, are observed at pH 7. However, in the unfolded form and at pH 2 and 11, fast phases of vibrational relaxation dominate, revealing the energy dissipation occurring through the covalent bond interaction between the heme and the nearest amino acids. A significant shortening of the excited-state lifetime of Trp is observed at various pH values at 280 nm excitation due to resonance energy transfer to the heme. The longer time constant (25 ps) observed in the unfolded form is attributed to a complete global conformational relaxation of Cyt c.

摘要

利用飞秒泵浦-探测光谱,研究了重要的电子传递血红素蛋白——铁细胞色素c(Cyt c)在酸性至碱性介质中及其未折叠形式下的激发态动力学,通过激发血红素和色氨酸(Trp)来了解血红素的电子、振动和构象弛豫。在390 nm激发下,发现血红素在不同pH值下的电子弛豫约为150 fs,在未折叠形式下增加到480 fs。在pH 7时观察到血红素的多步振动弛豫动力学,包括快速和慢速过程。然而,在未折叠形式以及pH 2和11时,振动弛豫的快速阶段占主导,揭示了通过血红素与最邻近氨基酸之间的共价键相互作用发生的能量耗散。在280 nm激发下,由于共振能量转移至血红素,在不同pH值下观察到Trp的激发态寿命显著缩短。在未折叠形式中观察到的较长时间常数(25 ps)归因于Cyt c的完全全局构象弛豫。

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