Govind Chinju, Paul Megha, Karunakaran Venugopal
Photosciences and Photonics Section, Chemical Sciences and Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology, Thiruvananthapuram 695 019, Kerala, India.
Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India.
J Phys Chem B. 2020 Apr 9;124(14):2769-2777. doi: 10.1021/acs.jpcb.9b11957. Epub 2020 Mar 27.
The ubiquitous electron transfer heme protein, Cytochrome c (Cyt c) catalyzes the peroxidation of cardiolipin (CL) in the early stage of apoptosis, where Cyt c undergoes conformational changes leading to the partial unfolding of the protein. Here the interaction dynamics of Cyt c with liposomes having different charges [CL, - 2; POPG (2-Oleoyl-1-palmitoyl--glycero-3-phospho-rac-(1-glycerol) sodium salt), -1; and POPC (2-Oleoyl-1-palmitoyl--glycero-3-phosphocholine), 0] leading to various degrees of partial unfolding is investigated with steady state optical spectroscopy and femtosecond time-resolved pump-probe spectroscopy. The signature of the partial unfolding of the protein was observed in the absorption, fluorescence, and CD spectra of Cyt c-liposome complexes with an increase of lipid/protein (L/P) ratio, and the protein was refolded by the addition of 0.1 M of NaCl. The femtosecond transient absorption spectra of the complexes were measured by selectively exciting the heme and tryptophan (Trp) at 385 and 280 nm, respectively. Though significant changes were not observed in the excited state relaxation dynamics of the heme in liposomes by exciting at 385 nm, the 280 nm excitation exhibited a systematic increase of the excited state relaxation dynamics leading to the increase of lifetime of Trp and global conformational relaxation dynamics with the increase of anionic charge of the lipids. This reveals the decrease of efficiency of fluorescence resonance energy transfer from Trp to heme due to the increase of distance between them upon increase of partial unfolding of the proteins by liposomes. Such observation exhibits the Trp as a marker amino acid to reflect the dynamics of partial unfolding of the protein rising from the change in the tertiary structure and axial ligand interaction of the heme proteins in liposomes. The relaxation dynamics of the complexes in the presence of salt are similar to that of the protein alone, reflecting that the refolding of the protein and the interactions are dominated by electrostatic interaction rather than the hydrophobic interaction.
普遍存在的电子传递血红素蛋白——细胞色素c(Cyt c),在细胞凋亡早期催化心磷脂(CL)的过氧化反应,在此过程中Cyt c会发生构象变化,导致蛋白质部分展开。本文采用稳态光谱和飞秒时间分辨泵浦-探测光谱,研究了Cyt c与具有不同电荷的脂质体(CL,-2;POPG(2-油酰基-1-棕榈酰基-sn-甘油-3-磷酸-rac-(1-甘油)钠盐),-1;以及POPC(2-油酰基-1-棕榈酰基-sn-甘油-3-磷酸胆碱),0)之间的相互作用动力学,这些脂质体会导致不同程度的部分展开。随着脂质/蛋白质(L/P)比值的增加,在Cyt c-脂质体复合物的吸收光谱、荧光光谱和圆二色光谱中观察到了蛋白质部分展开的特征,并且通过添加0.1 M的NaCl可使蛋白质重新折叠。分别在385和280 nm处选择性激发血红素和色氨酸(Trp),测量了复合物的飞秒瞬态吸收光谱。尽管在385 nm处激发时,脂质体中血红素的激发态弛豫动力学未观察到显著变化,但280 nm激发显示,随着脂质阴离子电荷的增加,激发态弛豫动力学系统增加,导致Trp寿命延长和整体构象弛豫动力学增加。这表明,由于脂质体使蛋白质部分展开增加,Trp与血红素之间的距离增大,导致荧光共振能量从Trp转移到血红素的效率降低。这种观察结果表明,Trp作为一个标记氨基酸,可以反映脂质体中血红素蛋白三级结构和轴向配体相互作用变化引起的蛋白质部分展开动力学。盐存在下复合物的弛豫动力学与单独蛋白质的弛豫动力学相似,这表明蛋白质的重新折叠和相互作用主要由静电相互作用而非疏水相互作用主导。