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内在无序的钙调蛋白通过“串上的纽扣”机制与钙调素结合。

Intrinsically disordered caldesmon binds calmodulin via the "buttons on a string" mechanism.

作者信息

Permyakov Sergei E, Permyakov Eugene A, Uversky Vladimir N

机构信息

Protein Research Group, Institute for Biological Instrumentation, Russian Academy of Sciences , Pushchino, Moscow Region , Russia.

Protein Research Group, Institute for Biological Instrumentation, Russian Academy of Sciences , Pushchino, Moscow Region , Russia ; Department of Molecular Medicine, University of South Florida , Tampa, FL , USA.

出版信息

PeerJ. 2015 Sep 22;3:e1265. doi: 10.7717/peerj.1265. eCollection 2015.

Abstract

We show here that chicken gizzard caldesmon (CaD) and its C-terminal domain (residues 636-771, CaD136) are intrinsically disordered proteins. The computational and experimental analyses of the wild type CaD136 and series of its single tryptophan mutants (W674A, W707A, and W737A) and a double tryptophan mutant (W674A/W707A) suggested that although the interaction of CaD136 with calmodulin (CaM) can be driven by the non-specific electrostatic attraction between these oppositely charged molecules, the specificity of CaD136-CaM binding is likely to be determined by the specific packing of important CaD136 tryptophan residues at the CaD136-CaM interface. It is suggested that this interaction can be described as the "buttons on a charged string" model, where the electrostatic attraction between the intrinsically disordered CaD136 and the CaM is solidified in a "snapping buttons" manner by specific packing of the CaD136 "pliable buttons" (which are the short segments of fluctuating local structure condensed around the tryptophan residues) at the CaD136-CaM interface. Our data also show that all three "buttons" are important for binding, since mutation of any of the tryptophans affects CaD136-CaM binding and since CaD136 remains CaM-buttoned even when two of the three tryptophans are mutated to alanines.

摘要

我们在此表明,鸡胗钙调蛋白(CaD)及其C末端结构域(第636 - 771位氨基酸残基,CaD136)是内在无序蛋白。对野生型CaD136及其一系列单色氨酸突变体(W674A、W707A和W737A)以及双色氨酸突变体(W674A/W707A)的计算和实验分析表明,尽管CaD136与钙调蛋白(CaM)的相互作用可由这些带相反电荷分子之间的非特异性静电吸引驱动,但CaD136 - CaM结合的特异性可能由CaD136 - CaM界面处重要的CaD136色氨酸残基的特定堆积决定。有人提出,这种相互作用可描述为“带电绳子上的纽扣”模型,其中内在无序的CaD136与CaM之间的静电吸引通过CaD136“柔韧纽扣”(即围绕色氨酸残基凝聚的波动局部结构的短片段)在CaD136 - CaM界面处的特定堆积以“扣纽扣”的方式固化。我们的数据还表明,所有三个“纽扣”对结合都很重要,因为任何一个色氨酸的突变都会影响CaD136 - CaM结合,并且即使三个色氨酸中的两个突变为丙氨酸,CaD136仍与CaM结合。

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