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设计用于免疫治疗和亚单位疫苗的B细胞表位

Designing B-Cell Epitopes for Immunotherapy and Subunit Vaccines.

作者信息

Singh Harinder, Gupta Sudheer, Gautam Ankur, Raghava Gajendra P S

机构信息

Bioinformatics Centre, CSIR-Institute of Microbial Technology, Sector-39A, Chandigarh, 160036, India.

出版信息

Methods Mol Biol. 2015;1348:327-40. doi: 10.1007/978-1-4939-2999-3_28.

Abstract

Rationally designed subunit vaccines mainly consist of small peptides or B-cell epitopes, which can stimulate the body's immune response. Development of subunit vaccines is a very tedious and costly process. One of the imperative and crucial steps of vaccine development is the identification of highly competent B-cell epitopes as most of the proteins and fragments of proteins are immunologically irrelevant. With the advances in bioinformatics tools, it can be possible to precisely narrow down potential B-cell epitopes from the whole proteome of any pathogen. This chapter sheds light on prediction and designing of B-cell epitopes using two in silico tools LBtope and IgPred.

摘要

合理设计的亚单位疫苗主要由小肽或B细胞表位组成,可刺激机体的免疫反应。亚单位疫苗的研发是一个非常繁琐且成本高昂的过程。疫苗研发中必不可少且至关重要的步骤之一是鉴定高效能的B细胞表位,因为大多数蛋白质及其片段在免疫方面是无关的。随着生物信息学工具的进步,有可能从任何病原体的整个蛋白质组中精确缩小潜在B细胞表位的范围。本章将介绍使用两种计算机工具LBtope和IgPred对B细胞表位进行预测和设计。

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