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基于稳定同位素标记氨基酸在细胞培养中定量分析白细胞介素-2(IL-2)和白细胞介素-15(IL-15)诱导的T淋巴细胞中蛋白质酪氨酸磷酸化变化

SILAC-based quantification of changes in protein tyrosine phosphorylation induced by Interleukin-2 (IL-2) and IL-15 in T-lymphocytes.

作者信息

Osinalde Nerea, Sánchez-Quiles Virginia, Akimov Vyacheslav, Blagoev Blagoy, Kratchmarova Irina

机构信息

Department of Biochemistry and Molecular Biology, University of Southern Denmark, Odense M, Denmark.

出版信息

Data Brief. 2015 Aug 22;5:53-8. doi: 10.1016/j.dib.2015.08.007. eCollection 2015 Dec.

Abstract

This data article presents the first large-scale quantitative phosphoproteomics dataset generated to decipher the signaling networks initiated by IL-2 and IL-15 in T-lymphocytes. Data was collected by combining immunoprecipitation of tyrosine phosphorylated proteins and TiO2-based phosphopeptide enrichment with SILAC-based quantitative mass spectrometry. We report all the proteins and phosphotyrosine-containing peptides identified and quantified in IL-2- and IL-15-stimulated T-lymphocytes. The gene ontology analysis of IL-2 and IL-15 effector proteins detected in the present work is also included. The data supplied in this article is related to the research work entitled "Simultaneous dissection and comparison of IL-2 and IL-15 signaling pathways by global quantitative phosphoproteomics" [1]. All mass spectrometry data have been deposited in the ProteomeXchange with the identifier PXD001129.

摘要

本数据文章展示了首个大规模定量磷酸化蛋白质组学数据集,该数据集用于解析T淋巴细胞中由白细胞介素-2(IL-2)和白细胞介素-15(IL-15)启动的信号网络。通过将酪氨酸磷酸化蛋白的免疫沉淀、基于二氧化钛的磷酸肽富集与基于稳定同位素标记氨基酸细胞培养技术(SILAC)的定量质谱相结合来收集数据。我们报告了在IL-2和IL-15刺激的T淋巴细胞中鉴定和定量的所有蛋白质以及含磷酸酪氨酸的肽段。本文还包括了在当前工作中检测到的IL-2和IL-15效应蛋白的基因本体分析。本文提供的数据与题为“通过全局定量磷酸化蛋白质组学同时剖析和比较IL-2和IL-15信号通路”的研究工作相关[1]。所有质谱数据已存入蛋白质组交换库,标识符为PXD001129。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3731/4564383/e7d1c52ac297/gr1.jpg

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