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使用FIJI(ImageJ)从连续冠状切片重建全脑小鼠图像。

Whole Mouse Brain Image Reconstruction from Serial Coronal Sections Using FIJI (ImageJ).

作者信息

Paletzki Ronald, Gerfen Charles R

机构信息

Laboratory of Systems Neuroscience, NIMH, Bethesda, Maryland.

出版信息

Curr Protoc Neurosci. 2015 Oct 1;73:1.25.1-1.25.21. doi: 10.1002/0471142301.ns0125s73.

DOI:10.1002/0471142301.ns0125s73
PMID:26426384
Abstract

Whole-brain reconstruction of the mouse enables comprehensive analysis of the distribution of neurochemical markers, the distribution of anterogradely labeled axonal projections or retrogradely labeled neurons projecting to a specific brain site, or the distribution of neurons displaying activity-related markers in behavioral paradigms. This unit describes a method to produce whole-brain reconstruction image sets from coronal brain sections with up to four fluorescent markers using the freely available image-processing program FIJI (ImageJ).

摘要

小鼠全脑重建能够全面分析神经化学标记物的分布、顺行标记的轴突投射或逆行标记的投射到特定脑区的神经元的分布,或者在行为范式中显示活动相关标记物的神经元的分布。本单元介绍了一种使用免费的图像处理程序FIJI(ImageJ)从冠状脑切片生成具有多达四种荧光标记物的全脑重建图像集的方法。

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DEFiNE: A Method for Enhancement and Quantification of Fluorescently Labeled Axons.DEFiNE:一种增强和定量荧光标记轴突的方法。
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