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Draft Genome Sequence of Erwinia billingiae OSU19-1, Isolated from a Pear Tree Canker.
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Genetic Analysis of a Pathogenic Erwinia sp. Isolated from Pear in Japan.
Phytopathology. 2003 Nov;93(11):1393-9. doi: 10.1094/PHYTO.2003.93.11.1393.
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Molecular comparison of pathogenic bacteria from pear trees in Japan and the fire blight pathogen Erwinia amylovora.
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Detection of Erwinia species from the apple and pear flora by mass spectroscopy of whole cells and with novel PCR primers.
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Growth inhibition of Erwinia amylovora and related Erwinia species by neutralized short‑chain fatty acids.
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Erwinia piriflorinigrans sp. nov., a novel pathogen that causes necrosis of pear blossoms.
Int J Syst Evol Microbiol. 2011 Mar;61(Pt 3):561-567. doi: 10.1099/ijs.0.020479-0. Epub 2010 Apr 9.
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Genetic islands in pome fruit pathogenic and non-pathogenic Erwinia species and related plasmids.
Front Microbiol. 2015 Aug 28;6:874. doi: 10.3389/fmicb.2015.00874. eCollection 2015.

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Conservation of Erwinia amylovora pathogenicity-relevant genes among Erwinia genomes.
Arch Microbiol. 2017 Dec;199(10):1335-1344. doi: 10.1007/s00203-017-1409-7. Epub 2017 Jul 10.

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Disentangling associated genomes.
Methods Enzymol. 2013;531:445-64. doi: 10.1016/B978-0-12-407863-5.00020-4.
2
REAPR: a universal tool for genome assembly evaluation.
Genome Biol. 2013 May 27;14(5):R47. doi: 10.1186/gb-2013-14-5-r47.
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IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth.
Bioinformatics. 2012 Jun 1;28(11):1420-8. doi: 10.1093/bioinformatics/bts174. Epub 2012 Apr 11.
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ABySS: a parallel assembler for short read sequence data.
Genome Res. 2009 Jun;19(6):1117-23. doi: 10.1101/gr.089532.108. Epub 2009 Feb 27.
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Aggressive assembly of pyrosequencing reads with mates.
Bioinformatics. 2008 Dec 15;24(24):2818-24. doi: 10.1093/bioinformatics/btn548. Epub 2008 Oct 24.
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Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
Genome Res. 2008 May;18(5):821-9. doi: 10.1101/gr.074492.107. Epub 2008 Mar 18.
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The RAST Server: rapid annotations using subsystems technology.
BMC Genomics. 2008 Feb 8;9:75. doi: 10.1186/1471-2164-9-75.

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