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通过Illumina小RNA深度测序在FK506免疫抑制下的神经同种异体移植小鼠模型中鉴定循环miRNA

Identification of Circulating miRNAs in a Mouse Model of Nerve Allograft Transplantation under FK506 Immunosuppression by Illumina Small RNA Deep Sequencing.

作者信息

Wu Shao-Chun, Rau Cheng-Shyuan, Yang Johnson Chia-Shen, Lu Tsu-Hsiang, Wu Yi-Chan, Chen Yi-Chun, Tzeng Siou-Ling, Wu Chia-Jung, Lin Chia-Wei, Hsieh Ching-Hua

机构信息

Department of Anesthesiology, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, No. 123, Ta-Pei Road, Niao-Song District, Kaohsiung 833, Taiwan.

Department of Neurosurgery, Kaohsiung Chang Gung Memorial Hospital and Chang Gung University College of Medicine, No. 123, Ta-Pei Road, Niao-Song District, Kaohsiung 833, Taiwan.

出版信息

Dis Markers. 2015;2015:863192. doi: 10.1155/2015/863192. Epub 2015 Sep 8.

Abstract

BACKGROUND

This study aimed to establish the expression profile of circulating microRNAs (miRNAs) during nerve allotransplantation in the presence and absence of FK506 immunosuppression.

METHODS

A 1 cm BALB/c donor sciatic nerve graft was transplanted into the sciatic nerve gaps created in recipient C57BL/6 mice with or without daily FK506 immunosuppression [1 mg/(kg·d)]. At 3, 7, and 14 d after nerve allotransplantation, serum samples were collected for miRNA expression analysis by Illumina small RNA deep sequencing.

RESULTS

Sequence analysis showed that the dominant size of circulating small RNAs after nerve allotransplantation was 22 nucleotides, followed by 23-nucleotide sequences. Nine upregulated circulating miRNAs (let-7e-5p, miR-101a-3p, miR-151-5p, miR-181a-5p, miR-204-5p, miR-340-5p, miR-381-3p, miR-411-5p, miR-9-5p, and miR-219-2-3p) were identified at 3 d, but none was identified at 7 or 14 d. Among them, miR-9-5p had the highest fold-change of >50-fold, followed by miR-340-5p with 38.8-fold. The presence of these nine miRNAs was not significant at 7 and 14 d after nerve allotransplantation with or without immunosuppression, showing that these miRNAs are not ideal biomarkers for monitoring rejection of deep-buried nerve allografts, a response usually observed later.

CONCLUSIONS

We identified nine upregulated circulating miRNAs, which may have a biological function, particularly during the early stages after nerve allotransplantation under FK506 immunosuppression.

摘要

背景

本研究旨在确定在有或没有FK506免疫抑制的情况下,神经同种异体移植过程中循环微小RNA(miRNA)的表达谱。

方法

将1厘米长的BALB/c供体坐骨神经移植物移植到接受C57BL/6小鼠的坐骨神经缺损处,分别给予或不给予每日FK506免疫抑制[1毫克/(千克·天)]。在神经同种异体移植后3、7和14天,收集血清样本,通过Illumina小RNA深度测序进行miRNA表达分析。

结果

序列分析表明,神经同种异体移植后循环小RNA的主要大小为22个核苷酸,其次是23个核苷酸序列。在第3天鉴定出9种上调的循环miRNA(let-7e-5p、miR-101a-3p、miR-151-5p、miR-181a-5p、miR-204-5p、miR-340-5p、miR-381-3p、miR-411-5p、miR-9-5p和miR-219-2-3p),但在第7天或第14天未鉴定出。其中,miR-9-5p的变化倍数最高,>50倍,其次是miR-340-5p,为38.8倍。在有或没有免疫抑制的神经同种异体移植后第7天和第14天,这9种miRNA的存在不显著,表明这些miRNA不是监测深埋神经同种异体移植排斥反应的理想生物标志物,这种反应通常在后期观察到。

结论

我们鉴定出9种上调的循环miRNA,它们可能具有生物学功能,特别是在FK506免疫抑制下神经同种异体移植后的早期阶段。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e5aa/4578739/4c40ddb1c78d/DM2015-863192.001.jpg

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