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新种向日葵土壤芽孢杆菌,从向日葵田土壤中分离得到。

Bacillus depressus sp. nov., isolated from soil of a sunflower field.

作者信息

Wei Xuexin, Xin Di, Xin Yuhua, Zhang Hao, Wang Tianying, Zhang Jianli

机构信息

School of Life Science, Beijing Institute of Technology, Beijing, 100081, People's Republic of China.

China General Microbiological Culture Collection Center, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, People's Republic of China.

出版信息

Antonie Van Leeuwenhoek. 2016 Jan;109(1):13-20. doi: 10.1007/s10482-015-0605-1. Epub 2015 Oct 9.

Abstract

A Gram-stain positive, rod-shaped, endospore-forming and aerobic bacterium, designated BZ1(T), was isolated from a soil sample collected from a sunflower field in Wuyuan county, Inner Mongolia, China. On the basis of 16S rRNA gene sequence analysis, the isolate was found to be a member of the genus Bacillus and the close phylogenetic relatives to be Bacillus gottheilii WCC 4585(T), Bacillus oceanisediminis H2(T), Bacillus mesonae FJAT-13985(T) and Bacillus horneckiae DSM 23495(T) with 98.3, 98.1, 98.0 and 97.6 % sequence similarity, respectively. Strain BZ1(T) was found to grow at 6-40 °C (optimum 30-33 °C), pH 6.0-9.0 (optimum pH 7.0) and 0-5.5 % (w/v) NaCl (optimum 0.5 %). The cell wall diamino acid of the peptidoglycan of strain BZ1(T) was identified as meso-diaminopimelic acid and the predominant respiratory quinone as MK-7. The major cellular fatty acids were found to be iso-C15:0, anteiso-C15:0 and iso-C14:0, and the polar lipids to consist of diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The novel strain was found to have a DNA G + C content 44.5 mol%. DNA-DNA hybridization with closely related strains was low. Based on phenotypic, phylogenetic and chemotaxonomic results, it is concluded that strain BZ1(T) represents a novel species within the genus Bacillus, for which we propose the name Bacillus depressus sp. nov. The type strain is BZ1(T) (= CGMCC 1.15124(T) = KCTC 33643(T)).

摘要

从中国内蒙古自治区五原县向日葵田采集的土壤样本中分离出一株革兰氏染色阳性、杆状、产芽孢的需氧细菌,命名为BZ1(T)。基于16S rRNA基因序列分析,该分离株被发现是芽孢杆菌属的成员,与戈氏芽孢杆菌WCC 4585(T)、海洋芽孢杆菌H2(T)、凉粉草芽孢杆菌FJAT-13985(T)和霍氏芽孢杆菌DSM 23495(T)亲缘关系较近,序列相似性分别为98.3%、98.1%、98.0%和97.6%。发现菌株BZ1(T)在6-40°C(最适温度30-33°C)、pH 6.0-9.0(最适pH 7.0)和0-5.5%(w/v)NaCl(最适0.5%)条件下生长。菌株BZ1(T)肽聚糖的细胞壁二氨基氨基酸被鉴定为内消旋二氨基庚二酸,主要呼吸醌为MK-7。主要细胞脂肪酸为异-C15:0、anteiso-C15:0和异-C14:0,极性脂质由双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺组成。该新菌株的DNA G + C含量为44.5 mol%。与密切相关菌株的DNA-DNA杂交率较低。基于表型、系统发育和化学分类学结果,得出结论:菌株BZ1(T)代表芽孢杆菌属内的一个新物种,为此我们提议将其命名为凹陷芽孢杆菌(Bacillus depressus sp. nov.)。模式菌株为BZ1(T)(= CGMCC 1.15124(T) = KCTC 33643(T))。

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