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链状芽孢杆菌新种,一种从苏打湖分离出的耐碱细菌。

Bacillus catenulatus sp. nov., an alkalitolerant bacterium isolated from a soda lake.

作者信息

Sultanpuram Vishnuvardhan Reddy, Mothe Thirumala, Chintalapati Sasikala, Chintalapati Venkata Ramana

机构信息

Microbial Ecology Laboratory, Department of Applied Biosciences, Mahatma Gandhi University, Anneparthy, Yellareddygudem (PO), Nalgonda, 508254, India.

Bacterial Discovery Laboratory, Centre for Environment, Institute of Science and Technology, J. N. T. University, Kukatpally, Hyderabad, 500085, India.

出版信息

Arch Microbiol. 2017 Dec;199(10):1391-1397. doi: 10.1007/s00203-017-1413-y. Epub 2017 Jul 25.

Abstract

Two novel (18C and 6C) Gram-stain-positive, rod shaped, motile and endospore-forming bacterial strains were isolated from Lonar soda lake, India. Based on 16S rRNA gene sequence analysis, strains 18C and 6C were identified as belonging to the class Firmibacteria, and were most closely related to Bacillus cohnii KCTC 3572 (99.3 and 99.9%, respectively), Bacillus zhanjiangensis KCTC 13713 (97.4 and 98.0%, respectively), Bacillus halmapalus LMG 17950 (97.0 and 97.6%, respectively) and other members in the genus Bacillus (<97.0%). However, the DNA-DNA relatedness between 18C and 6C and B. cohnii KCTC 3572 (49.6 ± 0.9 and 51.6 ± 0.7, respectively), B. zhanjiangensis KCTC 13713 (42.9 ± 0.8 and 47.1 ± 0.3, respectively) and B. halmapalus LMG 17950 (39.9 ± 0.8 and 40.8 ± 0.3, respectively) indicated that the novel strains were distantly related to these strains. Further, the high 16S rRNA gene sequence similarity (100%) and DNA-DNA relatedness (90 ± 5%) suggested that strains 18C and 6C were members of a genomospecies. The strains grew optimally at a pH of 7.5 with 2-3% (w/v) NaCl and temperature of 37 °C. Strains 18C and 6C were catalase and oxidase negative. The cell wall of strain 18C contained meso-diaminopimelic acid as the diagnostic diamino acid, which was in contrast with its nearest neighbour B. cohnii KCTC 3572, which contained ornithine and aspartic acid. Polar lipids include diphosphatidylglycerol (DPG), phosphatidylglycerol (PG), phosphatidylethanolamine (PE), an unknown phospholipid (PL) and three unknown lipids (L1-3). The predominant isoprenoid quinone was MK-7. iso-C (32.5%) was the predominant fatty acid and significant proportions of anteiso-C (19.5%), C (11.5%), iso-C (9.5%) and anteiso-C (6.3%) were also detected. The DNA G + C content of strains 18C and 6C were 39.3 and 39.2 mol%, respectively. The results of molecular, biochemical and chemotaxonomic tests showed a clear differentiation of strains 18C and 6C from all other members of the genus Bacillus, for which the name Bacillus catenulatus sp. nov. is proposed. The type strain is 18C (=KCTC 33781 = CGMCC 1.15475).

摘要

从印度洛纳尔碱湖分离出两株新型(18C和6C)革兰氏染色阳性、杆状、具运动性且能形成芽孢的细菌菌株。基于16S rRNA基因序列分析,18C和6C菌株被鉴定为属于厚壁菌门,与科恩芽孢杆菌KCTC 3572(分别为99.3%和99.9%)、湛江芽孢杆菌KCTC 13713(分别为97.4%和98.0%)、嗜盐芽孢杆菌LMG 17950(分别为97.0%和97.6%)以及芽孢杆菌属的其他成员(<97.0%)关系最为密切。然而,18C和6C与科恩芽孢杆菌KCTC 3572(分别为49.6±0.9和51.6±0.7)、湛江芽孢杆菌KCTC 13713(分别为42.9±0.8和47.1±0.3)以及嗜盐芽孢杆菌LMG 17950(分别为39.9±0.8和40.8±0.3)之间的DNA-DNA相关性表明,这些新型菌株与这些菌株关系较远。此外,高16S rRNA基因序列相似性(100%)和DNA-DNA相关性(90±5%)表明,18C和6C菌株是一个基因组种的成员。这些菌株在pH值为7.5、NaCl浓度为2-3%(w/v)且温度为37°C时生长最佳。18C和6C菌株过氧化氢酶和氧化酶均为阴性。18C菌株的细胞壁含有内消旋二氨基庚二酸作为诊断性二氨基酸,这与其最接近的科恩芽孢杆菌KCTC 3572不同,后者含有鸟氨酸和天冬氨酸。极性脂质包括双磷脂酰甘油(DPG)、磷脂酰甘油(PG)、磷脂酰乙醇胺(PE)、一种未知磷脂(PL)和三种未知脂质(L1-3)。主要的类异戊二烯醌为MK-7。异-C(32.5%)是主要脂肪酸,同时也检测到相当比例的anteiso-C(19.5%)、C(11.5%)、异-C(9.5%)和anteiso-C(6.3%)。18C和6C菌株的DNA G+C含量分别为39.3和39.2 mol%。分子、生化和化学分类学测试结果表明,18C和6C菌株与芽孢杆菌属的所有其他成员有明显区别,为此提出了新名称链状芽孢杆菌(Bacillus catenulatus sp. nov.)。模式菌株为18C(=KCTC 33781 = CGMCC 1.15475)。

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