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使用表面等离子体共振对人血清中的蛋白质生物标志物进行无校准浓度分析。

Calibration-free concentration analysis of protein biomarkers in human serum using surface plasmon resonance.

作者信息

Grover Shah Veenita, Ray Sandipan, Karlsson Robert, Srivastava Sanjeeva

机构信息

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India; Wipro GE Healthcare, Mumbai, India.

Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai 400076, India.

出版信息

Talanta. 2015 Nov 1;144:801-8. doi: 10.1016/j.talanta.2015.06.074. Epub 2015 Jul 10.

Abstract

In complex biological samples such as serum, determination of specific and active concentration of target proteins, independent of a calibration curve, will be valuable in many applications. Calibration-free concentration analysis (CFCA) is a surface plasmon resonance (SPR)-based label-free approach, which calculates active concentration of proteins using their known diffusion coefficient and observed changes in binding rates at different flow rates under diffusion-limited conditions. Here, for the first time we demonstrate the application of CFCA for determining protein biomarker abundance, specifically serum amyloid A (SAA), directly in the serum samples of patients suffering from different infectious and non-infectious diseases. The assay involves preparation of appropriate reaction surfaces by immobilizing antibodies on CM5 chips via amine coupling followed by serum sample preparation and injection over activated and reference surfaces at flow-rates of 5 and 100 μL/min. The system was validated in healthy and diseased (infectious and non-infectious) serum samples by quantifying two different proteins: β2-microglobulin (β2M) and SAA. All concentration assays were performed for nearly 100 serum samples, which showed reliable quantification in unattended runs with high accuracy and sensitivity. The method could detect the serum β2M to as low as 13 ng/mL in 1000-fold serum dilution, indicating the possible utility of this approach to detect low abundance protein biomarkers in body fluids. Applying the CFCA approach, significant difference in serum abundance of SAA was identified in diseased subjects as compared to the healthy controls, which correlated well with our previous proteomic investigations. Estimation of SAA concentration for a subset of healthy and diseased sera was also performed using ELISA, and the trend was observed to be similar in both SPR assay and ELISA. The reproducibility of CFCA in various serum samples made the interpretation of assay simple and reliable. This study illustrates a significant step forward in rapid monitoring of several protein markers in serum samples, with utility in biomarker validation and other therapeutic applications.

摘要

在血清等复杂生物样本中,无需校准曲线即可测定目标蛋白的特定浓度和活性浓度,这在许多应用中都具有重要价值。无校准浓度分析(CFCA)是一种基于表面等离子体共振(SPR)的无标记方法,它利用蛋白质已知的扩散系数以及在扩散限制条件下不同流速下观察到的结合速率变化来计算蛋白质的活性浓度。在此,我们首次展示了CFCA在直接测定患有不同感染性和非感染性疾病患者血清样本中蛋白质生物标志物丰度方面的应用,特别是血清淀粉样蛋白A(SAA)。该检测方法包括通过胺偶联将抗体固定在CM5芯片上制备合适的反应表面,随后进行血清样本制备,并以5和100 μL/min的流速将其注入活化表面和参考表面。通过对两种不同蛋白质:β2-微球蛋白(β2M)和SAA进行定量,该系统在健康和患病(感染性和非感染性)血清样本中得到了验证。对近100份血清样本进行了所有浓度检测,这些样本在无人值守运行中显示出可靠的定量结果,具有高精度和高灵敏度。该方法在1000倍血清稀释液中可检测到低至13 ng/mL的血清β2M,表明该方法在检测体液中低丰度蛋白质生物标志物方面具有潜在应用价值。应用CFCA方法,与健康对照相比,患病受试者血清中SAA的丰度存在显著差异,这与我们之前的蛋白质组学研究结果高度相关。还使用酶联免疫吸附测定(ELISA)对一部分健康和患病血清的SAA浓度进行了估计,并且在SPR检测和ELISA中观察到的趋势相似。CFCA在各种血清样本中的可重复性使得检测结果的解释简单可靠。这项研究表明在快速监测血清样本中的多种蛋白质标志物方面向前迈出了重要一步,在生物标志物验证和其他治疗应用中具有实用价值。

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