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对新西兰发光蕈蚊Arachnocampa luminosa的RNA序列进行比较分析,揭示了与生物发光相关的基因。

Comparative RNA seq analysis of the New Zealand glowworm Arachnocampa luminosa reveals bioluminescence-related genes.

作者信息

Sharpe Miriam L, Dearden Peter K, Gimenez Gregory, Krause Kurt L

机构信息

Department of Biochemistry, University of Otago, Dunedin, New Zealand.

Otago Genomics & Bioinformatics Facility, University of Otago, Dunedin, New Zealand.

出版信息

BMC Genomics. 2015 Oct 21;16:825. doi: 10.1186/s12864-015-2006-2.

Abstract

BACKGROUND

The New Zealand glowworm is the larva of a carnivorous fungus gnat that produces bioluminescence to attract prey. The bioluminescent system of the glowworm is evolutionarily distinct from other well-characterised systems, especially that of the fireflies, and the molecules involved have not yet been identified. We have used high throughput sequencing technology to produce a transcriptome for the glowworm and identify transcripts encoding proteins that are likely to be involved in glowworm bioluminescence.

RESULTS

Here we report the sequencing and annotation of the first transcriptome of the glowworm, and a differential analysis of expression from the glowworm light organ compared with non-light organ tissue. The analysis identified six transcripts encoding proteins that are potentially involved in glowworm bioluminescence. Three of these proteins are members of the ANL superfamily of adenylating enzymes, with similar amino acid sequences to that of the luciferase enzyme found in fireflies (31 to 37 % identical), and are candidate luciferases for the glowworm bioluminescent system. The remaining three transcripts encode putative aminoacylase, phosphatidylethanolamine-binding and glutathione S-transferase proteins.

CONCLUSIONS

This research provides a basis for further biochemical studies into how the glowworm produces light, and a source of genetic information to aid future ecological and evolutionary studies of the glowworm.

摘要

背景

新西兰萤火虫是一种肉食性蕈蚊的幼虫,它会产生生物发光来吸引猎物。萤火虫的生物发光系统在进化上与其他特征明确的系统不同,尤其是萤火虫的系统,并且其中涉及的分子尚未被鉴定出来。我们使用高通量测序技术生成了萤火虫的转录组,并鉴定了编码可能参与萤火虫生物发光的蛋白质的转录本。

结果

在此我们报告了萤火虫首个转录组的测序和注释,以及萤火虫发光器官与非发光器官组织的表达差异分析。该分析鉴定出六个编码可能参与萤火虫生物发光的蛋白质的转录本。其中三种蛋白质是腺苷酸化酶ANL超家族的成员,其氨基酸序列与萤火虫中发现的荧光素酶相似(同一性为31%至37%),并且是萤火虫生物发光系统的候选荧光素酶。其余三个转录本编码假定的氨基酰化酶、磷脂酰乙醇胺结合蛋白和谷胱甘肽S-转移酶蛋白。

结论

这项研究为进一步深入研究萤火虫如何发光提供了生化研究基础,也为未来萤火虫的生态和进化研究提供了遗传信息来源。

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