• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种新型热稳定蛋白标签:通过蛋白质工程对嗜热栖热菌DNA烷基转移酶进行优化

A novel thermostable protein-tag: optimization of the Sulfolobus solfataricus DNA- alkyl-transferase by protein engineering.

作者信息

Vettone Antonella, Serpe Mario, Hidalgo Aurelio, Berenguer José, del Monaco Giovanni, Valenti Anna, Rossi Mosé, Ciaramella Maria, Perugino Giuseppe

机构信息

Institute of Biosciences and BioResources, National Council of Research of Italy, Via P. Castellino 111, 80131 Naples, Italy

出版信息

Extremophiles. 2016 Jan;20(1):1-13. doi: 10.1007/s00792-015-0791-9.

DOI:10.1007/s00792-015-0791-9
PMID:26499124
Abstract

In the last decade, a powerful biotechnological tool for the in vivo and in vitro specific labeling of proteins (SNAP-tag™ technology) was proposed as a valid alternative to classical protein-tags (green fluorescent proteins, GFPs). This was made possible by the discovery of the irreversible reaction of the human alkylguanine-DNA-alkyl-transferase (hAGT) in the presence of benzyl-guanine derivatives. However, the mild reaction conditions and the general instability of the mesophilic SNAP-tag™ make this new approach not fully applicable to (hyper-)thermophilic and, in general, extremophilic organisms. Here, we introduce an engineered variant of the thermostable alkylguanine-DNA-alkyl-transferase from the Archaea Sulfolobus solfataricus (SsOGT-H5), which displays a catalytic efficiency comparable to the SNAP-tag™ protein, but showing high intrinsic stability typical of proteins from this organism. The successful heterologous expression obtained in a thermophilic model organism makes SsOGT-H5 a valid candidate as protein-tag for organisms living in extreme environments.

摘要

在过去十年中,一种用于体内和体外蛋白质特异性标记的强大生物技术工具(SNAP-tag™技术)被提出,作为经典蛋白质标签(绿色荧光蛋白,GFP)的有效替代方案。这是通过发现人烷基鸟嘌呤-DNA-烷基转移酶(hAGT)在苄基鸟嘌呤衍生物存在下的不可逆反应实现的。然而,嗜温性SNAP-tag™的温和反应条件和普遍不稳定性使得这种新方法不完全适用于(超)嗜热生物,一般来说也不适用于嗜极端生物。在这里,我们介绍了一种来自嗜热古菌嗜热栖热菌(SsOGT-H5)的热稳定烷基鸟嘌呤-DNA-烷基转移酶的工程变体,它表现出与SNAP-tag™蛋白相当的催化效率,但具有该生物体蛋白质典型的高内在稳定性。在嗜热模式生物中成功实现的异源表达使SsOGT-H5成为生活在极端环境中的生物体蛋白质标签的有效候选者。

相似文献

1
A novel thermostable protein-tag: optimization of the Sulfolobus solfataricus DNA- alkyl-transferase by protein engineering.一种新型热稳定蛋白标签:通过蛋白质工程对嗜热栖热菌DNA烷基转移酶进行优化
Extremophiles. 2016 Jan;20(1):1-13. doi: 10.1007/s00792-015-0791-9.
2
Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein.调控 DNA 烷化损伤修复热稳定蛋白活性和稳定性的结构-功能关系。
Nucleic Acids Res. 2015 Oct 15;43(18):8801-16. doi: 10.1093/nar/gkv774. Epub 2015 Jul 30.
3
Crystal structure of a thermophilic O-alkylguanine-DNA alkyltransferase-derived self-labeling protein-tag in covalent complex with a fluorescent probe.热嗜碱基 O-烷基鸟嘌呤-DNA 烷基转移酶衍生的自标记蛋白标签与荧光探针共价复合物的晶体结构。
Biochem Biophys Res Commun. 2018 Jun 7;500(3):698-703. doi: 10.1016/j.bbrc.2018.04.139. Epub 2018 Apr 30.
4
In vivo and in vitro protein imaging in thermophilic archaea by exploiting a novel protein tag.通过利用一种新型蛋白质标签对嗜热古菌进行体内和体外蛋白质成像。
PLoS One. 2017 Oct 3;12(10):e0185791. doi: 10.1371/journal.pone.0185791. eCollection 2017.
5
Activity and regulation of archaeal DNA alkyltransferase: conserved protein involved in repair of DNA alkylation damage.古菌 DNA 烷基转移酶的活性和调节:涉及修复 DNA 烷基化损伤的保守蛋白。
J Biol Chem. 2012 Feb 3;287(6):4222-31. doi: 10.1074/jbc.M111.308320. Epub 2011 Dec 13.
6
First thermostable CLIP- by rational design applied to an archaeal -alkyl-guanine-DNA-alkyl-transferase.首次通过合理设计将热稳定的CLIP应用于古菌的O6-烷基鸟嘌呤-DNA烷基转移酶。
Comput Struct Biotechnol J. 2022 Sep 18;20:5275-5286. doi: 10.1016/j.csbj.2022.09.015. eCollection 2022.
7
The Sulfolobus solfataricus electron donor partners of thermophilic CYP119: an unusual non-NAD(P)H-dependent cytochrome P450 system.嗜热栖热袍菌CYP119的电子供体伙伴:一种不同寻常的非NAD(P)H依赖型细胞色素P450系统。
Arch Biochem Biophys. 2005 Feb 1;434(1):169-77. doi: 10.1016/j.abb.2004.10.022.
8
A highly acid-stable and thermostable endo-beta-glucanase from the thermoacidophilic archaeon Sulfolobus solfataricus.来自嗜热嗜酸古菌嗜热栖热菌的一种高度耐酸且耐热的内切β-葡聚糖酶。
Biochem J. 2005 Jan 15;385(Pt 2):581-8. doi: 10.1042/BJ20041388.
9
Engineering the allosteric properties of archaeal non-phosphorylating glyceraldehyde-3-phosphate dehydrogenases.改造古菌非磷酸化甘油醛-3-磷酸脱氢酶的变构特性
Biochim Biophys Acta. 2014 Apr;1844(4):759-66. doi: 10.1016/j.bbapap.2014.01.017. Epub 2014 Jan 31.
10
Homodimeric hexaprenyl pyrophosphate synthase from the thermoacidophilic crenarchaeon Sulfolobus solfataricus displays asymmetric subunit structures.来自嗜热嗜酸泉古菌嗜热栖热菌的同型二聚体六异戊二烯基焦磷酸合酶呈现出不对称的亚基结构。
J Bacteriol. 2005 Dec;187(23):8137-48. doi: 10.1128/JB.187.23.8137-8148.2005.

引用本文的文献

1
Alkylated DNA repair by a novel HhH-GPD family protein from Crenarchaea.来自泉古菌的一种新型HhH-GPD家族蛋白对烷基化DNA的修复
Nucleic Acids Res. 2025 Jan 11;53(2). doi: 10.1093/nar/gkaf012.
2
A fluorescent reporter system for anaerobic thermophiles.一种用于厌氧嗜热菌的荧光报告系统。
Front Bioeng Biotechnol. 2023 Jul 5;11:1226889. doi: 10.3389/fbioe.2023.1226889. eCollection 2023.
3
Archaeal DNA alkylation repair conducted by DNA glycosylase and methyltransferase.古菌 DNA 烷基化修复由 DNA 糖苷酶和甲基转移酶执行。

本文引用的文献

1
Structure-function relationships governing activity and stability of a DNA alkylation damage repair thermostable protein.调控 DNA 烷化损伤修复热稳定蛋白活性和稳定性的结构-功能关系。
Nucleic Acids Res. 2015 Oct 15;43(18):8801-16. doi: 10.1093/nar/gkv774. Epub 2015 Jul 30.
2
Engineering color variants of green fluorescent protein (GFP) for thermostability, pH-sensitivity, and improved folding kinetics.工程化绿色荧光蛋白(GFP)的颜色变体以提高其热稳定性、pH 敏感性和改善折叠动力学。
Appl Microbiol Biotechnol. 2015 Feb;99(3):1205-16. doi: 10.1007/s00253-014-5975-1. Epub 2014 Aug 13.
3
DNA-guided DNA interference by a prokaryotic Argonaute.
Appl Microbiol Biotechnol. 2023 May;107(10):3131-3142. doi: 10.1007/s00253-023-12506-3. Epub 2023 Apr 10.
4
First thermostable CLIP- by rational design applied to an archaeal -alkyl-guanine-DNA-alkyl-transferase.首次通过合理设计将热稳定的CLIP应用于古菌的O6-烷基鸟嘌呤-DNA烷基转移酶。
Comput Struct Biotechnol J. 2022 Sep 18;20:5275-5286. doi: 10.1016/j.csbj.2022.09.015. eCollection 2022.
5
Folding-upon-Repair DNA Nanoswitches for Monitoring the Activity of DNA Repair Enzymes.用于监测 DNA 修复酶活性的修复折叠 DNA 纳米开关。
Angew Chem Int Ed Engl. 2021 Mar 22;60(13):7283-7289. doi: 10.1002/anie.202016223. Epub 2021 Feb 17.
6
The SNAP- technology revised: an effective by using a universal azide-based substrate.SNAP 技术修订版:使用通用叠氮化物底物的有效方法。
J Enzyme Inhib Med Chem. 2021 Dec;36(1):85-97. doi: 10.1080/14756366.2020.1841182.
7
-alkylguanine-DNA Alkyltransferases in Microbes Living on the Edge: From Stability to Applicability.微生物中的烷基鸟嘌呤-DNA 烷基转移酶:从稳定性到适用性。
Int J Mol Sci. 2020 Apr 20;21(8):2878. doi: 10.3390/ijms21082878.
8
A journey down to hell: new thermostable protein-tags for biotechnology at high temperatures.下地狱之旅:高温生物技术用新型热稳定蛋白标签。
Extremophiles. 2020 Jan;24(1):81-91. doi: 10.1007/s00792-019-01134-3. Epub 2019 Sep 25.
9
Thermostability enhancement of the α-carbonic anhydrase from Sulfurihydrogenibium yellowstonense by using the anchoring-and-self-labelling-protein-tag system (ASL).利用锚定和自我标记蛋白标签系统(ASL)增强 Sulfurihydrogenibium yellowstonense 中的α-碳酸酐酶的热稳定性。
J Enzyme Inhib Med Chem. 2019 Dec;34(1):946-954. doi: 10.1080/14756366.2019.1605991.
10
Optimization of an In Vitro Transcription/Translation System Based on Cell Lysate.基于细胞裂解物的体外转录/翻译系统的优化
Archaea. 2019 Feb 11;2019:9848253. doi: 10.1155/2019/9848253. eCollection 2019.
原核 Argonaute 引导的 DNA 干扰
Nature. 2014 Mar 13;507(7491):258-261. doi: 10.1038/nature12971. Epub 2014 Feb 16.
4
Biochemical and structural studies of the Mycobacterium tuberculosis O6-methylguanine methyltransferase and mutated variants.结核分枝杆菌 O6-甲基鸟嘌呤甲基转移酶及其突变体的生化和结构研究。
J Bacteriol. 2013 Jun;195(12):2728-36. doi: 10.1128/JB.02298-12. Epub 2013 Apr 5.
5
Alkyltransferase-like protein (Atl1) distinguishes alkylated guanines for DNA repair using cation-π interactions.烷基转移酶样蛋白 (Atl1) 通过阳离子-π 相互作用区分用于 DNA 修复的烷基化鸟嘌呤。
Proc Natl Acad Sci U S A. 2012 Nov 13;109(46):18755-60. doi: 10.1073/pnas.1209451109. Epub 2012 Oct 29.
6
Directed evolution of the suicide protein O⁶-alkylguanine-DNA alkyltransferase for increased reactivity results in an alkylated protein with exceptional stability.通过定向进化自杀蛋白 O⁶-烷基鸟嘌呤-DNA 烷基转移酶以提高反应活性,得到了一种烷基化蛋白,其稳定性异常高。
Biochemistry. 2012 Feb 7;51(5):986-94. doi: 10.1021/bi2016537. Epub 2012 Jan 25.
7
Activity and regulation of archaeal DNA alkyltransferase: conserved protein involved in repair of DNA alkylation damage.古菌 DNA 烷基转移酶的活性和调节:涉及修复 DNA 烷基化损伤的保守蛋白。
J Biol Chem. 2012 Feb 3;287(6):4222-31. doi: 10.1074/jbc.M111.308320. Epub 2011 Dec 13.
8
Multifaceted roles of alkyltransferase and related proteins in DNA repair, DNA damage, resistance to chemotherapy, and research tools.烷基转移酶及相关蛋白在 DNA 修复、DNA 损伤、化疗耐药性及研究工具中的多方面作用。
Chem Res Toxicol. 2011 May 16;24(5):618-39. doi: 10.1021/tx200031q. Epub 2011 Apr 28.
9
How to obtain labeled proteins and what to do with them.如何获取标记蛋白以及如何处理它们。
Curr Opin Biotechnol. 2010 Dec;21(6):766-76. doi: 10.1016/j.copbio.2010.09.011. Epub 2010 Oct 26.
10
Thermus thermophilus as biological model.嗜热栖热菌作为生物学模型。
Extremophiles. 2009 Mar;13(2):213-31. doi: 10.1007/s00792-009-0226-6. Epub 2009 Jan 21.