Shirke Abhijit N, Basore Danielle, Butterfoss Glenn L, Bonneau Richard, Bystroff Christopher, Gross Richard A
Department of Chemistry and Chemical Biology, Rensselaer Polytechnic Institute, Troy, New York.
Center for Biotechnology and Interdisciplinary Studies, Rensselaer Polytechnic Institute, Troy, New York.
Proteins. 2016 Jan;84(1):60-72. doi: 10.1002/prot.24955. Epub 2015 Nov 26.
Cutinases are powerful hydrolases that can cleave ester bonds of polyesters such as poly(ethylene terephthalate) (PET), opening up new options for enzymatic routes for polymer recycling and surface modification reactions. Cutinase from Aspergillus oryzae (AoC) is promising owing to the presence of an extended groove near the catalytic triad which is important for the orientation of polymeric chains. However, the catalytic efficiency of AoC on rigid polymers like PET is limited by its low thermostability; as it is essential to work at or over the glass transition temperature (Tg) of PET, that is, 70 °C. Consequently, in this study we worked toward the thermostabilization of AoC. Use of Rosetta computational protein design software in conjunction with rational design led to a 6 °C improvement in the thermal unfolding temperature (Tm) and a 10-fold increase in the half-life of the enzyme activity at 60 °C. Surprisingly, thermostabilization did not improve the rate or temperature optimum of enzyme activity. Three notable findings are presented as steps toward designing more thermophilic cutinase: (a) surface salt bridge optimization produced enthalpic stabilization, (b) mutations to proline reduced the entropy loss upon folding, and (c) the lack of a correlative increase in the temperature optimum of catalytic activity with thermodynamic stability suggests that the active site is locally denatured at a temperature below the Tm of the global structure.
角质酶是一种强大的水解酶,能够裂解聚酯(如聚对苯二甲酸乙二酯,PET)的酯键,为聚合物回收利用和表面改性反应的酶促途径开辟了新的选择。米曲霉角质酶(AoC)很有前景,因为在催化三联体附近存在一个延伸的凹槽,这对聚合物链的取向很重要。然而,AoC对PET等刚性聚合物的催化效率受到其低热稳定性的限制;因为在PET的玻璃化转变温度(Tg)即70°C或更高温度下工作至关重要。因此,在本研究中,我们致力于提高AoC的热稳定性。结合理性设计使用Rosetta计算蛋白质设计软件,使热解链温度(Tm)提高了6°C,并且在60°C时酶活性的半衰期增加了10倍。令人惊讶的是,热稳定性的提高并没有改善酶活性的速率或最适温度。作为设计更耐热角质酶的步骤,我们提出了三个显著发现:(a)表面盐桥优化产生了焓稳定作用,(b)脯氨酸突变减少了折叠时的熵损失,(c)催化活性的最适温度没有随着热力学稳定性的相关增加而升高,这表明活性位点在低于整体结构Tm的温度下局部变性。