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通过下一代测序诊断的遗传性周围神经病

Hereditary peripheral neuropathies diagnosed by next-generation sequencing.

作者信息

Høyer Helle, Busk Øyvind L, Holla Øystein L, Strand Linda, Russell Michael B, Skjelbred Camilla F, Braathen Geir J

机构信息

Seksjon for medisinsk genetikk Avdeling for laboratoriemedisin Sykehuset Telemark.

Forskningssenteret Akershus universitetssykehus.

出版信息

Tidsskr Nor Laegeforen. 2015 Nov 3;135(20):1838-44. doi: 10.4045/tidsskr.14.1002.

Abstract

BACKGROUND

Next-generation sequencing (NGS) is a genetic technique used to determine the order of nucleotides in DNA. The technique has proved to be more efficient than the traditional method, Sanger sequencing, for sequencing multiple genes. NGS is now being used to diagnose disorders in which multiple genes are involved. This study has examined whether next-generation sequencing produces a greater number of positive diagnoses than its traditional counterpart in patients with suspected hereditary peripheral neuropathy.

MATERIAL AND METHOD

This study is a retrospective review of samples from 103 patients investigated for hereditary peripheral neuropathy, received by Telemark Hospital in the period 2012-14. After exclusion of duplication/deletion of PMP22, 96 samples were analysed by NGS with physical enrichment of 52 hereditary peripheral neuropathy genes.

RESULTS

A genetic cause was identified in 35 patients (34%) with peripheral neuropathy, of which 28 (27%) were point mutations identified by NGS.

INTERPRETATION

Of the pathogenic point mutations identified in this study, 12 were in genes that would previously have been analysed by Sanger sequencing in our department, whereas 16 were in genes that would not previously have been tested.

摘要

背景

下一代测序(NGS)是一种用于确定DNA中核苷酸顺序的基因技术。事实证明,该技术在对多个基因进行测序时比传统的桑格测序方法更有效。目前,NGS正被用于诊断涉及多个基因的疾病。本研究调查了在疑似遗传性周围神经病患者中,下一代测序是否比传统方法能产生更多的阳性诊断结果。

材料与方法

本研究是对泰勒马克医院在2012年至2014年期间接收的103例因遗传性周围神经病接受调查的患者样本进行的回顾性分析。在排除PMP22基因的重复/缺失后,对96个样本进行了NGS分析,并对52个遗传性周围神经病相关基因进行了物理富集。

结果

在35例(34%)周围神经病患者中确定了遗传病因,其中28例(27%)是通过NGS鉴定出的点突变。

解读

在本研究中鉴定出的致病点突变中,有12个位于此前本部门会用桑格测序法进行分析的基因中,而另外16个位于此前未检测过的基因中。

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