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整合定量构效关系和类推法进行环境评估。

Integrating QSAR and read-across for environmental assessment.

作者信息

Benfenati E, Roncaglioni A, Petoumenou M I, Cappelli C I, Gini G

机构信息

a IRCCS - Istituto di Ricerche Farmacologiche Mario Negri , Milano , Italy.

b Dipartimento di Elettronica, Informazione e Bioingegneria , Politecnico di Milano , Milano , Italy.

出版信息

SAR QSAR Environ Res. 2015;26(7-9):605-18. doi: 10.1080/1062936X.2015.1078408. Epub 2015 Sep 11.

Abstract

Read-across and QSAR have different traditions and drawbacks. We address here two main questions: (1) How do we solve the issue of the subjectivity in the evaluation of data and results, which may be particularly critical for read-across, but may have a role also for the QSAR assessment? (2) How do we take advantage of the results of both approaches to support each other? The QSAR model starts from the training set. The presence of similar chemicals with property values close to that predicted can support the result. The approach in read-across is the opposite. The assessment is focused on the few substances similar to the target. The data quality of the similar chemicals is fundamental. A risk is poor standardization in the definition of 'similarity', because different approaches may be applied. Inspired by the principles of high transparency and reproducibility, a new program for read-across, called ToxRead, has been developed and made freely available ( www.toxgate.eu ). The output of ToxRead can be compared and integrated with the output of QSAR, within a weight-of-evidence strategy. We discuss the evaluation and integration of ToxRead and QSAR with examples of the assessment of bioconcentration factors of chemicals.

摘要

类推法和定量构效关系有不同的传统和缺点。我们在此探讨两个主要问题:(1)我们如何解决数据和结果评估中的主观性问题,这对类推法可能尤为关键,但对定量构效关系评估也可能有影响?(2)我们如何利用这两种方法的结果相互支持?定量构效关系模型从训练集开始。存在具有与预测值相近的性质值的相似化学品可以支持结果。类推法的方法则相反。评估集中在与目标相似的少数物质上。相似化学品的数据质量至关重要。一个风险是在“相似性”定义中标准化不足,因为可能应用不同的方法。受高透明度和可重复性原则的启发,已开发出一个名为ToxRead的新类推法程序并免费提供(www.toxgate.eu)。在证据权重策略内,ToxRead的输出可以与定量构效关系的输出进行比较和整合。我们通过化学品生物富集因子评估的例子来讨论ToxRead和定量构效关系的评估及整合。

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