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重编程和发育过程中的X染色体重新激活

X chromosome reactivation in reprogramming and in development.

作者信息

Pasque Vincent, Plath Kathrin

机构信息

Department of Biological Chemistry, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095, USA.

Department of Biological Chemistry, Eli and Edythe Broad Center of Regenerative Medicine and Stem Cell Research, Jonsson Comprehensive Cancer Center, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095, USA.

出版信息

Curr Opin Cell Biol. 2015 Dec;37:75-83. doi: 10.1016/j.ceb.2015.10.006. Epub 2015 Nov 11.

DOI:10.1016/j.ceb.2015.10.006
PMID:26540406
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4688236/
Abstract

Dramatic epigenetic changes take place during mammalian differentiation from the naïve pluripotent state including the silencing of one of the two X chromosomes in female cells through X chromosome inactivation. Conversely, reprogramming of somatic cells to naive pluripotency is coupled to X chromosome reactivation (XCR). Recent studies in the mouse system have shed light on the mechanisms of XCR by uncovering the timing and steps of XCR during reprogramming to induced pluripotent stem cells (iPSCs), allowing the generation of testable hypotheses during embryogenesis. In contrast, analyses of the X chromosome in human iPSCs have revealed important differences between mouse and human reprogramming processes that can partially be explained by the establishment of distinct pluripotent states and impact disease modeling and the application of human pluripotent stem cells. Here, we review recent literature on XCR as a readout and determinant of reprogramming to pluripotency.

摘要

在哺乳动物从原始多能状态开始分化的过程中,会发生显著的表观遗传变化,包括通过X染色体失活使雌性细胞中的两条X染色体之一沉默。相反,将体细胞重编程为原始多能性与X染色体重新激活(XCR)相关联。小鼠系统中的最新研究通过揭示重编程为诱导多能干细胞(iPSC)过程中XCR的时间和步骤,阐明了XCR的机制,从而使得在胚胎发育过程中能够产生可检验的假设。相比之下,对人类iPSC中X染色体的分析揭示了小鼠和人类重编程过程之间的重要差异,这在一定程度上可以通过不同多能状态的建立来解释,并且会影响疾病建模以及人类多能干细胞的应用。在此,我们综述了有关XCR作为重编程为多能性的一个指标和决定因素的最新文献。

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X chromosome reactivation in reprogramming and in development.重编程和发育过程中的X染色体重新激活
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Biol Sex Differ. 2024 Dec 5;15(1):101. doi: 10.1186/s13293-024-00681-5.
2
Early reactivation of clustered genes on the inactive X chromosome during somatic cell reprogramming.体细胞重编程过程中失活 X 染色体上簇集基因的早期激活。
Stem Cell Reports. 2022 Jan 11;17(1):53-67. doi: 10.1016/j.stemcr.2021.11.008. Epub 2021 Dec 16.
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TAD-like single-cell domain structures exist on both active and inactive X chromosomes and persist under epigenetic perturbations.TAD 样单细胞结构存在于活性和失活 X 染色体上,并在表观遗传扰动下持续存在。
Genome Biol. 2021 Nov 8;22(1):309. doi: 10.1186/s13059-021-02523-8.
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Cells. 2021 Aug 10;10(8):2049. doi: 10.3390/cells10082049.
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Visualization of X chromosome reactivation in mouse primordial germ cells in vivo.体内可视化小鼠原始生殖细胞中的 X 染色体重新激活。
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New Insights into X-Chromosome Reactivation during Reprogramming to Pluripotency.重编程为多能性过程中X染色体重新激活的新见解
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本文引用的文献

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Cell Rep. 2015 May 26;11(8):1251-65. doi: 10.1016/j.celrep.2015.04.039. Epub 2015 May 14.
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Erosion of X Chromosome Inactivation in Human Pluripotent Cells Initiates with XACT Coating and Depends on a Specific Heterochromatin Landscape.X 染色体失活在人多能干细胞中的侵蚀始于 XACT 涂层,并依赖于特定的异染色质景观。
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The Xist lncRNA interacts directly with SHARP to silence transcription through HDAC3.Xist长链非编码RNA通过组蛋白去乙酰化酶3(HDAC3)直接与SHARP相互作用,使转录沉默。
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Stable X chromosome reactivation in female human induced pluripotent stem cells.女性诱导多能干细胞中稳定的 X 染色体重新激活。
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X chromosome reactivation dynamics reveal stages of reprogramming to pluripotency.X染色体重新激活动力学揭示了重编程为多能性的阶段。
Cell. 2014 Dec 18;159(7):1681-97. doi: 10.1016/j.cell.2014.11.040.