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本文引用的文献

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Characterization of cellulolytic activity in the gut of the terrestrial land slug Arion ater: Biochemical identification of targets for intensive study.陆生蛞蝓（Arion ater）肠道中纤维素分解活性的表征：深入研究靶点的生化鉴定
Comp Biochem Physiol B Biochem Mol Biol. 2014 Nov-Dec;177-178:29-35. doi: 10.1016/j.cbpb.2014.08.003. Epub 2014 Aug 20.
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REAPR: a universal tool for genome assembly evaluation.REAPR：一种用于基因组组装评估的通用工具。
Genome Biol. 2013 May 27;14(5):R47. doi: 10.1186/gb-2013-14-5-r47.
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GapFiller: a de novo assembly approach to fill the gap within paired reads.GapFiller：一种从头开始的组装方法，用于填补配对读取中的缺口。
BMC Bioinformatics. 2012;13 Suppl 14(Suppl 14):S8. doi: 10.1186/1471-2105-13-S14-S8. Epub 2012 Sep 7.
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Scaffolding pre-assembled contigs using SSPACE.使用 SSPACE 搭建预组装 contigs 的支架。
Bioinformatics. 2011 Feb 15;27(4):578-9. doi: 10.1093/bioinformatics/btq683. Epub 2010 Dec 12.
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Isolation and characterization of bacteria from the gut of Bombyx mori that degrade cellulose, xylan, pectin and starch and their impact on digestion.从家蚕肠道中分离和鉴定能够降解纤维素、木聚糖、果胶和淀粉的细菌及其对消化的影响。
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6
Cellulase and Other Polymer-Hydrolyzing Activities of Trichomitopsis termopsidis, a Symbiotic Protozoan from Termites.Termite共生原生动物嗜热毛壳菌的纤维素酶和其他聚合物水解活性。
Appl Environ Microbiol. 1985 Mar;49(3):622-6. doi: 10.1128/aem.49.3.622-626.1985.
7
GeneMarkS: a self-training method for prediction of gene starts in microbial genomes. Implications for finding sequence motifs in regulatory regions.GeneMarkS：一种用于预测微生物基因组中基因起始位点的自训练方法。对在调控区域中寻找序列基序的启示。
Nucleic Acids Res. 2001 Jun 15;29(12):2607-18. doi: 10.1093/nar/29.12.2607.

从沙漠地下白蚁金黄异白蚁肠道中分离出的柠檬酸杆菌属CtB7.12的基因组序列。

Genome Sequence of Citrobacter sp. CtB7.12, Isolated from the Gut of the Desert Subterranean Termite Heterotermes aureus.

作者信息

Fontes-Perez Héctor, Olvera-García Myrna, Chávez-Martínez America, Rodriguez-Almeida Felipe A, Arzola-Alvarez Claudio A, Sanchez-Flores Alejandro, Corral-Luna Agustín

机构信息

Facultad de Zootecnia y Ecología, Universidad Autónoma de Chihuahua, Chihuahua, Chihuahua, México.

Unidad de Secuenciación Masiva y Bioinformática, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, México.

出版信息

Genome Announc. 2015 Nov 5;3(6):e01290-15. doi: 10.1128/genomeA.01290-15.

DOI:10.1128/genomeA.01290-15
PMID:26543121
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4645206/
Abstract

The draft genome of Citrobacter sp. CtB7.12, isolated from termite gut, is presented here. This organism has been reported as a cellulolytic bacterium, which is biotechnologically important because it can be used as a gene donor for the ethanol and biofuel industries.

摘要

本文展示了从白蚁肠道分离出的柠檬酸杆菌属CtB7.12的基因组草图。据报道，这种微生物是一种纤维素分解菌，由于它可作为乙醇和生物燃料行业的基因供体，因而具有重要的生物技术意义。