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结合二维凝胶电泳和代谢组学数据以支持冈比亚按蚊两种主要物种在旱季的生存。

Combining two-dimensional gel electrophoresis and metabolomic data in support of dry-season survival in the two main species of the malarial mosquito Anopheles gambiae.

作者信息

Hidalgo K, Mouline K, Mamai W, Foucreau N, Dabiré K R, Bouchereau A, Simard F, Renault D

机构信息

Université de Rennes 1, UMR CNRS 6553 Ecobio, Campus de Beaulieu, 263 Avenue du Général Leclerc, CS 74205 35042 Rennes Cedex, France ; Institut de Recherche pour le Développement (IRD), UMR IRD 224-CNRS 5290-Université de Montpellier MIVEGEC, 911 Avenue Agropolis, BP 64501, 34394 Montpellier cedex 5, France.

Institut de Recherche pour le Développement (IRD), UMR IRD 224-CNRS 5290-Université de Montpellier MIVEGEC, 911 Avenue Agropolis, BP 64501, 34394 Montpellier cedex 5, France ; Institut de Recherche en Sciences de la Santé (IRSS), Direction Régionale de l'Ouest (DRO), 399 Avenue de la Liberté 01, BP 545 Bobo-Dioulasso, Burkina Faso.

出版信息

Data Brief. 2015 Sep 7;5:255-68. doi: 10.1016/j.dib.2015.08.031. eCollection 2015 Dec.

Abstract

In dry savannahs of West-Africa, the malarial mosquitoes of the Anopheles gambiae sensu stricto complex annually survive the harsh desiccating conditions of the dry season. However, the physiological and biochemical mechanisms underlying how these mosquitoes survive such desiccating conditions are still undefined, and controversial. In this context, we provide the first work examining both proteomic and metabolomic changes in the two molecular forms of A. gambiae s.s (M and S forms) experimentally exposed to the rainy and dry season conditions as they experience in the field. Protein abundances of the mosquitoes were measured using a two-dimensional fluorescence difference gel electrophoresis (2D DIGE) coupled with a matrix-assisted laser desorption/ionisation-time of flight (MALDI-TOF) and tandem mass spectrometry (MS) for protein identification. These assays were conducted by Applied Biomics (http://www.appliedbiomics.com, Applied Biomics, Inc. Hayward, CA, USA), and the mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium (http://proteomecentral.proteomexchange.org) via the PRIDE partner repository with the dataset identifier PXD000294. The metabolomic analysis was conducted using both Acquity UPLC(®) system (for amino acid identification), and a gas-chromatography-mass spectrometry platform (for sugars identification). Metabolomic fingerprintings were assessed in the University of Rennes 1, UMR CNRS 6553 EcoBio (France). A detailed interpretation of the obtained data can be found in Hidalgo et al. (2014) [1] (Journal of Insect Physiology (2014)).

摘要

在西非的干燥稀树草原,冈比亚按蚊狭义复合体内的疟蚊每年都能在旱季严酷的干燥条件下存活下来。然而,这些蚊子如何在这种干燥条件下存活的生理和生化机制仍不明确,且存在争议。在此背景下,我们开展了首项研究,检测了冈比亚按蚊狭义亚种(M型和S型)两种分子形式在经历野外雨季和旱季条件时蛋白质组和代谢组的变化。使用二维荧光差异凝胶电泳(2D DIGE)结合基质辅助激光解吸/电离飞行时间质谱(MALDI-TOF)和串联质谱(MS)来测定蚊子的蛋白质丰度,以鉴定蛋白质。这些分析由应用生物组学公司(http://www.appliedbiomics.com,美国加利福尼亚州海沃德市应用生物组学公司)进行,质谱蛋白质组学数据已通过PRIDE合作伙伴库存入蛋白质组交换联盟(http://proteomecentral.proteomexchange.org),数据集标识符为PXD000294。代谢组分析使用了Acquity UPLC®系统(用于氨基酸鉴定)和气相色谱-质谱平台(用于糖类鉴定)。代谢组指纹图谱在法国雷恩第一大学、法国国家科学研究中心UMR 6553生态生物学实验室进行评估。所得数据的详细解读可在伊达尔戈等人(2014年)[1](《昆虫生理学杂志》(2014年))中找到。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3c7b/4589799/77a0014b1095/gr1.jpg

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