Hansen Mie Johanne, Pennanen Elin Anna Erica, Bojesen Anders Miki, Christensen Henrik, Bertelsen Mads Frost
Department of Veterinary Disease Biology,Faculty of Health and Medical Sciences, University of Copenhagen, Stigboejlen 4, 1870 Frederiksberg C,Denmark.
Center for Zoo and Wild Animal Health,Copenhagen Zoo, Roskildevej 38, 2000, Frederiksberg,Denmark.
Int J Syst Evol Microbiol. 2016 Feb;66(2):567-573. doi: 10.1099/ijsem.0.000759. Epub 2015 Nov 9.
A total of 13 Pasteurellaceae isolates from healthy freshwater turtles were characterized by genotypic and phenotypic tests. Phylogenetic analysis of partial 16S rRNA and rpoB gene sequences showed that the isolates investigated formed a monophyletic group. The closest related species based on 16S rRNA gene sequencing was Chelonobacter oris CCUG 55632T with 94.4 % similarity and the closest related species based on rpoB gene sequence comparison was [Pasteurella] testudinis CCUG 19802T with 91.5 % similarity. All the investigated isolates exhibited phenotypic characteristics of the family Pasteurellaceae. However, they could be separated from existing genera of the Pasteurellaceae by the following test results: indole, ornithine decarboxylase and Voges-Proskauer positive; and methyl red, urease and PNPG (α-glucosidase) negative. No X- or V-factor requirement was observed. A zone of β-haemolysis surrounded the colonies after 24 h of incubation on bovine blood agar at 37 °C. Acid was produced from l-arabinose, dulcitol, d-mannitol, sucrose and trehalose. Representative strain ELNT2xT had a fatty acid profile that was characteristic for members of the Pasteurellaceae. ELNT2xT expressed only one respiratory quinone, ubiquinone-8 (100 %). The DNA G+C content of strain ELNT2xT was 42.8 mol%. On the basis of both phylogenetic and phenotypic evidence, it is proposed that the strains should be classified as representatives of a novel species of a new genus, Testudinibacter aquarius gen. nov., sp. nov. The type strain of Testudinibacter aquarius is ELNT2xT ( = CCUG 65146T = DSM 28140T), which was isolated from the oral cavity of a captive eastern long-necked turtle (Chelodina longicollis) in Denmark in 2012.
对从健康淡水龟分离出的13株巴斯德氏菌科菌株进行了基因型和表型测试。对部分16S rRNA和rpoB基因序列的系统发育分析表明,所研究的分离株形成了一个单系群。基于16S rRNA基因测序,亲缘关系最近的物种是口腔龟杆菌CCUG 55632T,相似度为94.4%;基于rpoB基因序列比较,亲缘关系最近的物种是龟巴斯德氏菌CCUG 19802T,相似度为91.5%。所有研究的分离株均表现出巴斯德氏菌科的表型特征。然而,根据以下测试结果,它们可与巴斯德氏菌科现有的属区分开来:吲哚、鸟氨酸脱羧酶和Voges-Proskauer试验呈阳性;甲基红、脲酶和PNPG(α-葡萄糖苷酶)试验呈阴性。未观察到对X因子或V因子的需求。在37℃的牛血琼脂上孵育24小时后,菌落周围出现β-溶血环。从L-阿拉伯糖、卫矛醇、D-甘露醇、蔗糖和海藻糖产酸。代表性菌株ELNT2xT具有巴斯德氏菌科成员特有的脂肪酸谱。ELNT2xT仅表达一种呼吸醌,泛醌-8(100%)。菌株ELNT2xT的DNA G+C含量为42.8mol%。基于系统发育和表型证据,建议将这些菌株归类为一个新属——水生龟杆菌属(Testudinibacter aquarius)的新物种的代表。水生龟杆菌的模式菌株是ELNT2xT(=CCUG 65146T=DSM 28140T),于2012年从丹麦一只圈养的东部长颈龟(Chelodina longicollis)的口腔中分离得到。