Pushkareva Ekaterina, Pessi Igor S, Wilmotte Annick, Elster Josef
Centre for Polar Ecology, University of South Bohemia, 37005 ČeskéBudějovice, Czech Republic
Centre for Protein Engineering, University of Liège, 4000 Liège, Belgium.
FEMS Microbiol Ecol. 2015 Dec;91(12). doi: 10.1093/femsec/fiv143. Epub 2015 Nov 11.
Cyanobacterial diversity in soil crusts has been extensively studied in arid lands of temperate regions, particularly semi-arid steppes and warm deserts. Nevertheless, Arctic soil crusts have received far less attention than their temperate counterparts. Here, we describe the cyanobacterial communities from various types of soil crusts from Svalbard, High Arctic. Four soil crusts at different development stages (ranging from poorly-developed to well-developed soil crusts) were analysed using 454 pyrosequencing of the V3-V4 variable region of the cyanobacterial 16S rRNA gene. Analyses of 95 660 cyanobacterial sequences revealed a dominance of OTUs belonging to the orders Synechococcales, Oscillatoriales and Nostocales. The most dominant OTUs in the four studied sites were related to the filamentous cyanobacteria Leptolyngbya sp. Phylotype richness estimates increased from poorly- to mid-developed soil crusts and decreased in the well-developed lichenized soil crust. Moreover, pH, ammonium and organic carbon concentrations appeared significantly correlated with the cyanobacterial community structure.
在温带地区的干旱土地,特别是半干旱草原和温暖沙漠中,土壤结皮中的蓝藻多样性已得到广泛研究。然而,北极土壤结皮受到的关注远少于温带地区的土壤结皮。在此,我们描述了来自北极斯瓦尔巴群岛不同类型土壤结皮中的蓝藻群落。使用蓝藻16S rRNA基因V3 - V4可变区的454焦磷酸测序技术,对四个处于不同发育阶段(从不发达到发达的土壤结皮)的土壤结皮进行了分析。对95660条蓝藻序列的分析显示,属于聚球藻目、颤藻目和念珠藻目的操作分类单元(OTU)占主导地位。在四个研究地点中,最主要的OTU与丝状蓝藻细鞘丝藻属有关。从发育不良到中等发育的土壤结皮,系统发育型丰富度估计值增加,而在发育良好的地衣化土壤结皮中则下降。此外,pH值、铵和有机碳浓度似乎与蓝藻群落结构显著相关。