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西欧生物土壤结皮沿纬度梯度的蓝藻多样性。

Cyanobacterial diversity of western European biological soil crusts along a latitudinal gradient.

作者信息

Williams Laura, Loewen-Schneider Katharina, Maier Stefanie, Büdel Burkhard

机构信息

Plant Ecology and Systematics, Biology Institute, University of Kaiserslautern, PO Box 3049, 67653 Kaiserslautern, Germany

Plant Ecology and Systematics, Biology Institute, University of Kaiserslautern, PO Box 3049, 67653 Kaiserslautern, Germany.

出版信息

FEMS Microbiol Ecol. 2016 Oct;92(10). doi: 10.1093/femsec/fiw157. Epub 2016 Jul 12.

Abstract

Cyanobacteria associated with biological soil crusts (BSCs) have important attributes, such as nitrogen fixation and soil stabilisation. However, research on these organisms has been minimal, and their diversity and distribution throughout temperate Europe is currently unknown. The SCIN (Soil Crust International) project is a multidisciplinary research initiative that aims to achieve improved understanding of the BSCs of Europe, one facet being an investigation into the cyanobacterial communities of BSCs across a latitudinal gradient. Cyanobacteria assemblages were analysed by both morphological and molecular analysis. Two treatments were applied prior to DNA extraction, continued sample wetting and a dry sample process, and 16S ribosomal RNA (rRNA) amplicons were processed by Illumina MiSeq sequencing. The results reveal high and variable cyanobacterial diversity with each site showing a unique assemblage. Many common cyanobacterial genera, for example Nostoc and Microcoleus, were found in all sites but the abundances of different genera varied considerably. The polyphasic approach was found to be essential in recording the presence of important cyanobacteria that a single method itself did not highlight. The wet and dry treatments showed some differences in diversity, but mainly in abundance, this may suggest how cyanobacterial composition of BSCs changes with seasonal variability.

摘要

与生物土壤结皮(BSCs)相关的蓝细菌具有重要特性,如固氮和土壤稳定作用。然而,对这些生物的研究极少,目前其在整个欧洲温带地区的多样性和分布情况尚不清楚。土壤结皮国际(SCIN)项目是一项多学科研究计划,旨在增进对欧洲生物土壤结皮的了解,其中一个方面是对生物土壤结皮的蓝细菌群落沿纬度梯度进行调查。通过形态学和分子分析对蓝细菌组合进行了分析。在DNA提取之前应用了两种处理方法,持续的样品湿润和干燥样品处理过程,并且通过Illumina MiSeq测序对16S核糖体RNA(rRNA)扩增子进行了处理。结果显示蓝细菌多样性高且多变,每个地点都呈现出独特的组合。在所有地点都发现了许多常见的蓝细菌属,例如念珠藻属和微鞘藻属,但不同属的丰度差异很大。发现多相方法对于记录单一方法本身未突出显示的重要蓝细菌的存在至关重要。湿润和干燥处理在多样性上显示出一些差异,但主要是在丰度上,这可能表明生物土壤结皮的蓝细菌组成如何随季节变化而改变。

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