Dogga Sunil Kumar, Bartošová-Sojková Pavla, Lukeš Julius, Soldati-Favre Dominique
Department of Microbiology and Molecular Medicine, University of Geneva. CMU, 1 Rue Michel-Servet, CH-1211 Geneva 4, Switzerland.
Institute of Parasitology, Biology Centre, Branišovská 31, České Budějovice (Budweis), Czech Republic.
Protist. 2015 Dec;166(6):659-76. doi: 10.1016/j.protis.2015.09.003. Epub 2015 Sep 30.
To fill the knowledge gap on the biology of the fish coccidian Goussia janae, RNA extracted from exogenously sporulated oocysts was sequenced. Analysis by Trinity and Trinotate pipelines showed that 84.6% of assembled transcripts share the highest similarity with Toxoplasma gondii and Neospora caninum. Phylogenetic and interpretive analyses from RNA-seq data provide novel insight into the metabolic capabilities, composition of the invasive machinery and the phylogenetic relationships of this parasite of cold-blooded vertebrates with other coccidians. This allows re-evaluation of the phylogenetic position of G. janae and sheds light on the emergence of the highly successful obligatory intracellularity of apicomplexan parasites. G. janae possesses a partial glideosome and along with it, the metabolic capabilities and adaptions of G. janae might provide cues as to how apicomplexans adjusted to extra- or intra-cytoplasmic niches and also to become obligate intracellular parasites. Unlike the similarly localized epicellular Cryptosporidium spp., G. janae lacks the feeder organelle necessary for directly scavenging nutrients from the host. Transcriptome analysis indicates that G. janae possesses metabolic capabilities comparable to T. gondii. Additionally, this enteric coccidium might also access host cell nutrients given the presence of a recently identified gene encoding the molecular sieve at the parasitophorous vacuole membrane.
为填补鱼类球虫贾氏古氏球虫生物学知识的空白,对从外源性孢子化卵囊中提取的RNA进行了测序。通过Trinity和Trinotate管道分析表明,84.6%的组装转录本与刚地弓形虫和犬新孢子虫具有最高的相似性。RNA测序数据的系统发育和解释性分析为这种冷血脊椎动物寄生虫的代谢能力、侵入机制组成以及与其他球虫的系统发育关系提供了新的见解。这使得对贾氏古氏球虫的系统发育位置进行重新评估,并揭示了顶复门寄生虫高度成功的 obligatory intracellularity 的出现。贾氏古氏球虫拥有一个部分滑行体,与之一起,贾氏古氏球虫的代谢能力和适应性可能为顶复门寄生虫如何适应胞外或胞内生态位以及如何成为 obligate intracellular 寄生虫提供线索。与同样定位在细胞表面的隐孢子虫属不同,贾氏古氏球虫缺乏直接从宿主获取营养所需的摄食细胞器。转录组分析表明,贾氏古氏球虫具有与刚地弓形虫相当的代谢能力。此外,鉴于在寄生泡膜上存在一个最近鉴定的编码分子筛的基因,这种肠道球虫也可能获取宿主细胞营养。