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在存在测量误差和剂量反应非线性的情况下合并生物样本:在调查自闭症谱系障碍风险因素的出生队列背景下的模拟研究

Pooling Bio-Specimens in the Presence of Measurement Error and Non-Linearity in Dose-Response: Simulation Study in the Context of a Birth Cohort Investigating Risk Factors for Autism Spectrum Disorders.

作者信息

Heavner Karyn, Newschaffer Craig, Hertz-Picciotto Irva, Bennett Deborah, Burstyn Igor

机构信息

Department of Environmental and Occupational Health, Dornsife School of Public Health, Drexel University, Philadelphia, PA 19104, USA.

A.J. Drexel Autism Institute, Dornsife School of Public Health, Drexel University, Philadelphia, PA 19104, USA.

出版信息

Int J Environ Res Public Health. 2015 Nov 19;12(11):14780-99. doi: 10.3390/ijerph121114780.

DOI:10.3390/ijerph121114780
PMID:26610532
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4661679/
Abstract

We sought to determine the potential effects of pooling on power, false positive rate (FPR), and bias of the estimated associations between hypothetical environmental exposures and dichotomous autism spectrum disorders (ASD) status. Simulated birth cohorts in which ASD outcome was assumed to have been ascertained with uncertainty were created. We investigated the impact on the power of the analysis (using logistic regression) to detect true associations with exposure (X₁) and the FPR for a non-causal correlate of exposure (X₂, r = 0.7) for a dichotomized ASD measure when the pool size, sample size, degree of measurement error variance in exposure, strength of the true association, and shape of the exposure-response curve varied. We found that there was minimal change (bias) in the measures of association for the main effect (X₁). There is some loss of power but there is less chance of detecting a false positive result for pooled compared to individual level models. The number of pools had more effect on the power and FPR than the overall sample size. This study supports the use of pooling to reduce laboratory costs while maintaining statistical efficiency in scenarios similar to the simulated prospective risk-enriched ASD cohort.

摘要

我们试图确定合并对功效、假阳性率(FPR)以及假设的环境暴露与二分法自闭症谱系障碍(ASD)状态之间估计关联的偏差的潜在影响。创建了模拟出生队列,其中假设ASD结局的确定存在不确定性。我们研究了在合并样本量、总样本量、暴露测量误差方差程度、真实关联强度以及暴露-反应曲线形状变化时,对分析功效(使用逻辑回归)检测与暴露(X₁)的真实关联以及二分法ASD测量中暴露的非因果相关因素(X₂,r = 0.7)的FPR的影响。我们发现主要效应(X₁)的关联测量变化极小(偏差)。与个体水平模型相比,合并会导致一定的功效损失,但检测到假阳性结果的可能性较小。合并样本的数量对功效和FPR的影响大于总样本量。本研究支持在类似于模拟的前瞻性风险富集ASD队列的情况下,使用合并来降低实验室成本,同时保持统计效率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/c430adbb2366/ijerph-12-14780-g003a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/b720e2bbf732/ijerph-12-14780-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/57e532eb95d8/ijerph-12-14780-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/c430adbb2366/ijerph-12-14780-g003a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/b720e2bbf732/ijerph-12-14780-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/57e532eb95d8/ijerph-12-14780-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a740/4661679/c430adbb2366/ijerph-12-14780-g003a.jpg

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本文引用的文献

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A Simulation Study of Categorizing Continuous Exposure Variables Measured with Error in Autism Research: Small Changes with Large Effects.自闭症研究中对测量有误差的连续暴露变量进行分类的模拟研究:小变化产生大影响。
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2
Comparative two-dimensional polyacrylamide gel electrophoresis of the salivary proteome of children with autism spectrum disorder.自闭症谱系障碍儿童唾液蛋白质组的二维聚丙烯酰胺凝胶电泳比较
J Cell Mol Med. 2015 Nov;19(11):2664-78. doi: 10.1111/jcmm.12658. Epub 2015 Aug 20.
3
A Pilot Proteomic Analysis of Salivary Biomarkers in Autism Spectrum Disorder.
自闭症谱系障碍唾液生物标志物的初步蛋白质组学分析。
Autism Res. 2015 Jun;8(3):338-50. doi: 10.1002/aur.1450. Epub 2015 Jan 27.
4
Pooling samples for "top-down" molecular exposomics research: the methodology.用于“自上而下”分子暴露组学研究的样本合并:方法学
Environ Health. 2014 Feb 13;13(1):8. doi: 10.1186/1476-069X-13-8.
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Regression for skewed biomarker outcomes subject to pooling.针对存在合并情况的偏态生物标志物结果的回归分析。
Biometrics. 2014 Mar;70(1):202-11. doi: 10.1111/biom.12134. Epub 2014 Feb 12.
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