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微滴中蛋白质相互作用动力学的定量分析

Quantification of protein interaction kinetics in a micro droplet.

作者信息

Yin L L, Wang S P, Shan X N, Zhang S T, Tao N J

机构信息

Center for Bioelectronics and Biosensors, Biodesign Institute, Arizona State University, Tempe, Arizona 85287, USA.

College of Chemistry and Chemical Engineering, Chongqing University, Chongqing 400044, China.

出版信息

Rev Sci Instrum. 2015 Nov;86(11):114101. doi: 10.1063/1.4934802.

Abstract

Characterization of protein interactions is essential to the discovery of disease biomarkers, the development of diagnostic assays, and the screening for therapeutic drugs. Conventional flow-through kinetic measurements need relative large amount of sample that is not feasible for precious protein samples. We report a novel method to measure protein interaction kinetics in a single droplet with sub microliter or less volume. A droplet in a humidity-controlled environmental chamber is replacing the microfluidic channels as the reactor for the protein interaction. The binding process is monitored by a surface plasmon resonance imaging (SPRi) system. Association curves are obtained from the average SPR image intensity in the center area of the droplet. The washing step required by conventional flow-through SPR method is eliminated in the droplet method. The association and dissociation rate constants and binding affinity of an antigen-antibody interaction are obtained by global fitting of association curves at different concentrations. The result obtained by this method is accurate as validated by conventional flow-through SPR system. This droplet-based method not only allows kinetic studies for proteins with limited supply but also opens the door for high-throughput protein interaction study in a droplet-based microarray format that enables measurement of many to many interactions on a single chip.

摘要

蛋白质相互作用的表征对于疾病生物标志物的发现、诊断检测方法的开发以及治疗药物的筛选至关重要。传统的流通动力学测量需要相对大量的样品,这对于珍贵的蛋白质样品来说是不可行的。我们报道了一种在体积小于或等于亚微升的单个液滴中测量蛋白质相互作用动力学的新方法。在湿度控制的环境腔室中的一个液滴取代了微流体通道,作为蛋白质相互作用的反应器。结合过程由表面等离子体共振成像(SPRi)系统监测。结合曲线从液滴中心区域的平均SPR图像强度获得。液滴法省去了传统流通SPR方法所需的洗涤步骤。通过对不同浓度下的结合曲线进行全局拟合,获得抗原-抗体相互作用的结合和解离速率常数以及结合亲和力。如通过传统流通SPR系统验证的那样,该方法获得的结果是准确的。这种基于液滴的方法不仅允许对供应有限的蛋白质进行动力学研究,而且还为基于液滴的微阵列形式的高通量蛋白质相互作用研究打开了大门,该形式能够在单个芯片上测量多对多的相互作用。

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