Verdone Loredana, La Fortezza Marco, Ciccarone Fabio, Caiafa Paola, Zampieri Michele, Caserta Micaela
Istituto di Biologia e Patologia Molecolari, CNR c/o Dipartimento di Biologia e Biotecnologie, Sapienza Università di Roma, Rome, Italy.
Ludwig Maximilians University Munich, Planegg-Martinsried, Germany.
PLoS One. 2015 Dec 4;10(12):e0144287. doi: 10.1371/journal.pone.0144287. eCollection 2015.
Poly(ADP-ribosyl)ation (PARylation) is a posttranslational protein modification catalyzed by members of the poly(ADP-ribose) polymerase (PARP) enzyme family. PARylation regulates a wide variety of biological processes in most eukaryotic cells including energy metabolism and cell death, maintenance of genomic stability, chromatin structure and transcription. Inside the nucleus, cross-talk between PARylation and other epigenetic modifications, such as DNA and histone methylation, was already described. In the present work, using PJ34 or ABT888 to inhibit PARP activity or over-expressing poly(ADP-ribose) glycohydrolase (PARG), we show decrease of global histone H3 and H4 acetylation. This effect is accompanied by a reduction of the steady state mRNA level of p300, Pcaf, and Tnfα, but not of Dnmt1. Chromatin immunoprecipitation (ChIP) analyses, performed at the level of the Transcription Start Site (TSS) of these four genes, reveal that changes in histone acetylation are specific for each promoter. Finally, we demonstrate an increase of global deacetylase activity in nuclear extracts from cells treated with PJ34, whereas global acetyltransferase activity is not affected, suggesting a role for PARP in the inhibition of histone deacetylases. Taken together, these results show an important link between PARylation and histone acetylation regulated transcription.
聚(ADP-核糖)化(PARylation)是一种由聚(ADP-核糖)聚合酶(PARP)酶家族成员催化的翻译后蛋白质修饰。PARylation调节大多数真核细胞中的多种生物学过程,包括能量代谢和细胞死亡、基因组稳定性的维持、染色质结构和转录。在细胞核内,PARylation与其他表观遗传修饰(如DNA和组蛋白甲基化)之间的相互作用已有报道。在本研究中,使用PJ34或ABT888抑制PARP活性或过表达聚(ADP-核糖)糖苷水解酶(PARG),我们发现整体组蛋白H3和H4乙酰化水平降低。这种效应伴随着p300、Pcaf和Tnfα的稳态mRNA水平降低,但Dnmt1的水平未受影响。在这四个基因的转录起始位点(TSS)水平进行的染色质免疫沉淀(ChIP)分析表明,组蛋白乙酰化的变化对每个启动子都是特异性的。最后,我们证明用PJ34处理的细胞的核提取物中整体脱乙酰酶活性增加,而整体乙酰转移酶活性不受影响,这表明PARP在抑制组蛋白脱乙酰酶中起作用。综上所述,这些结果表明PARylation与组蛋白乙酰化调节的转录之间存在重要联系。