Institut D'Investigació Biomèdica de Bellvitge (IDIBELL), P-CMR[C], Hospital Duran I Reynals Gran Via de L'Hospitalet, 199-203, L'Hospitalet de Llobregat, 08908, Barcelona, Spain.
Department of Molecular Medicine, Sapienza University of Rome, Viale Regina Elena 324, 00161, Rome, Italy.
Sci Rep. 2020 Sep 15;10(1):15086. doi: 10.1038/s41598-020-72155-8.
The myogenic factor MyoD regulates skeletal muscle differentiation by interacting with a variety of chromatin-modifying complexes. Although MyoD can induce and maintain chromatin accessibility at its target genes, its binding and trans-activation ability can be limited by some types of not fully characterized epigenetic constraints. In this work we analysed the role of PARP1 in regulating MyoD-dependent gene expression. PARP1 is a chromatin-associated enzyme, playing a well recognized role in DNA repair and that is implicated in transcriptional regulation. PARP1 affects gene expression through multiple mechanisms, often involving the Poly(ADP-ribosyl)ation of chromatin proteins. In line with PARP1 down-regulation during differentiation, we observed that PARP1 depletion boosts the up-regulation of MyoD targets, such as p57, myogenin, Mef2C and p21, while its re-expression reverts this effect. We also found that PARP1 interacts with some MyoD-binding regions and that its presence, independently of the enzymatic activity, interferes with MyoD recruitment and gene induction. We finally suggest a relationship between the binding of PARP1 and the loss of the activating histone modification H3K4me3 at MyoD-binding regions. This work highlights not only a novel player in the epigenetic control of myogenesis, but also a repressive and catalytic-independent mechanisms by which PARP1 regulates transcription.
肌源性因子 MyoD 通过与多种染色质修饰复合物相互作用来调节骨骼肌分化。虽然 MyoD 可以诱导和维持其靶基因的染色质可及性,但它的结合和转录激活能力可能受到一些尚未完全阐明的表观遗传限制的限制。在这项工作中,我们分析了 PARP1 在调节 MyoD 依赖性基因表达中的作用。PARP1 是一种与染色质相关的酶,在 DNA 修复中发挥着公认的作用,并且与转录调控有关。PARP1 通过多种机制影响基因表达,通常涉及染色质蛋白的聚(ADP-核糖基)化。与分化过程中 PARP1 的下调一致,我们观察到 PARP1 耗竭会促进 MyoD 靶基因的上调,如 p57、myogenin、Mef2C 和 p21,而其重新表达则会逆转这种效应。我们还发现 PARP1 与一些 MyoD 结合区域相互作用,并且其存在(与酶活性无关)会干扰 MyoD 的募集和基因诱导。我们最后提出了 PARP1 结合与 MyoD 结合区域的激活组蛋白修饰 H3K4me3 丢失之间的关系。这项工作不仅突出了肌发生中表观遗传控制的一个新参与者,还突出了 PARP1 调节转录的一种抑制和非催化依赖机制。