嗜盐芽孢杆菌新种马赛嗜盐芽孢杆菌的非连续完成基因组序列及描述，该菌从人体肠道分离得到
Noncontiguous finished genome sequence and description of Virgibacillus massiliensis sp. nov., a moderately halophilic bacterium isolated from human gut.
作者信息
Khelaifia S, Croce O, Lagier J-C, Robert C, Couderc C, Di Pinto F, Davoust B, Djossou F, Raoult D, Fournier P-E
机构信息
Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes, UM 63, CNRS 7278, IRD 198, Inserm 1095, Institut Hospitalo-Universitaire Méditerranée-Infection, Faculté de médecine, Aix-Marseille Université, Marseille, France.
Centre Hospitalier André Rosemon, Cayenne, French Guiana.
出版信息
New Microbes New Infect. 2015 Oct 2;8:78-88. doi: 10.1016/j.nmni.2015.09.012. eCollection 2015 Nov.
Strain Vm-5(T) was isolated from the stool specimen of a 10-year-old Amazonian boy. This bacterium is a Gram-positive, strictly aerobic rod, motile by a polar flagellum. Here we describe its phenotypic characteristics and complete genome sequence. The 4 353 177 bp long genome exhibits a G + C content of 36.87% and contains 4394 protein-coding and 125 predicted RNA genes. Phylogenetically and genetically, strain Vm-c is a member of the genus Virgibacillus but is distinct enough to be classified as a new species. We propose the creation of V. massiliensis sp. nov., whose type strain is strain Vm-5(T) (CSUR P971 = DSM 28587).
菌株Vm-5(T)是从一名10岁亚马逊男孩的粪便标本中分离出来的。该细菌为革兰氏阳性、严格需氧杆菌，通过极鞭毛运动。在此，我们描述其表型特征和完整的基因组序列。该基因组长度为4353177 bp，G + C含量为36.87%，包含4394个蛋白质编码基因和125个预测的RNA基因。在系统发育和遗传方面，菌株Vm-c是 Virgibacillus 属的成员，但具有足够的独特性，可被归类为一个新物种。我们提议创建新种马西利亚维尔吉芽孢杆菌（V. massiliensis sp. nov.），其模式菌株为菌株Vm-5(T)（CSUR P971 = DSM 28587）。
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