Tóth Katalin Fejes, Pezic Dubravka, Stuwe Evelyn, Webster Alexandre
Division of Biology and Bioengineering, California Institute of Technology, 1200 E. California Blvd., Pasadena, CA, 91125, USA.
Adv Exp Med Biol. 2016;886:51-77. doi: 10.1007/978-94-017-7417-8_4.
Transposable elements (TEs) have the capacity to replicate and insert into new genomic locations. This contributs significantly to evolution of genomes, but can also result in DNA breaks and illegitimate recombination, and therefore poses a significant threat to genomic integrity. Excess damage to the germ cell genome results in sterility. A specific RNA silencing pathway, termed the piRNA pathway operates in germ cells of animals to control TE activity. At the core of the piRNA pathway is a ribonucleoprotein complex consisting of a small RNA, called piRNA, and a protein from the PIWI subfamily of Argonaute nucleases. The piRNA pathway relies on the specificity provided by the piRNA sequence to recognize complementary TE targets, while effector functions are provided by the PIWI protein. PIWI-piRNA complexes silence TEs both at the transcriptional level - by attracting repressive chromatin modifications to genomic targets - and at the posttranscriptional level - by cleaving TE transcripts in the cytoplasm. Impairment of the piRNA pathway leads to overexpression of TEs, significantly compromised genome structure and, invariably, germ cell death and sterility.The piRNA pathway is best understood in the fruit fly, Drosophila melanogaster, and in mouse. This Chapter gives an overview of current knowledge on piRNA biogenesis, and mechanistic details of both transcriptional and posttranscriptional TE silencing by the piRNA pathway. It further focuses on the importance of post-translational modifications and subcellular localization of the piRNA machinery. Finally, it provides a brief description of analogous pathways in other systems.
转座元件(TEs)具有复制并插入新基因组位置的能力。这对基因组的进化有重大贡献,但也可能导致DNA断裂和异常重组,因此对基因组完整性构成重大威胁。生殖细胞基因组的过度损伤会导致不育。一种特定的RNA沉默途径,称为piRNA途径,在动物的生殖细胞中发挥作用以控制TE的活性。piRNA途径的核心是一种核糖核蛋白复合体,它由一种称为piRNA的小RNA和来自AGO核酸酶PIWI亚家族的一种蛋白质组成。piRNA途径依赖于piRNA序列提供的特异性来识别互补的TE靶标,而效应功能则由PIWI蛋白提供。PIWI-piRNA复合体在转录水平上通过吸引抑制性染色质修饰到基因组靶标来沉默TE,在转录后水平上通过在细胞质中切割TE转录本来沉默TE。piRNA途径的损伤会导致TE的过度表达、基因组结构严重受损,并且不可避免地导致生殖细胞死亡和不育。在果蝇和小鼠中对piRNA途径的了解最为深入。本章概述了关于piRNA生物发生的当前知识,以及piRNA途径在转录和转录后沉默TE的机制细节。它还进一步关注了piRNA机制的翻译后修饰和亚细胞定位的重要性。最后,它简要描述了其他系统中的类似途径。