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通过固态核磁共振获取脂肪族质子作为非氘代蛋白质中的报告基团。

Access to aliphatic protons as reporters in non-deuterated proteins by solid-state NMR.

作者信息

Vasa Suresh Kumar, Rovó Petra, Giller Karin, Becker Stefan, Linser Rasmus

机构信息

Max-Planck Institute for Biophysical Chemistry, Department NMR-Based Structural Biology, Am Fassberg 11, 37077 Göttingen, Germany.

出版信息

Phys Chem Chem Phys. 2016 Mar 28;18(12):8359-63. doi: 10.1039/c5cp06601h.

Abstract

Interactions within proteins, with their surrounding, and with other molecules are mediated mostly by hydrogen atoms. In fully protonated, inhomogeneous, or larger proteins, however, aliphatic proton shifts tend to show little dispersion despite fast Magic-Angle Spinning. 3D correlations dispersing aliphatic proton shifts by their better resolved amide N/H shifts can alleviate this problem. Using inverse second-order cross-polarization (iSOCP), we here introduce dedicated and improved means to sensitively link site-specific chemical shift information from aliphatic protons with a backbone amide resolution. Thus, even in cases where protein deuteration is impossible, this approach may enable access to various aspects of protein functions that are reported on by protons.

摘要

蛋白质内部、与周围环境以及与其他分子之间的相互作用主要由氢原子介导。然而,在完全质子化、不均匀或较大的蛋白质中,尽管采用了快速魔角旋转,脂肪族质子位移往往显示出很少的分散。通过更好解析的酰胺N/H位移来分散脂肪族质子位移的三维相关性可以缓解这个问题。利用逆二阶交叉极化(iSOCP),我们在此引入了专门且改进的方法,以灵敏地将脂肪族质子的位点特异性化学位移信息与主链酰胺分辨率联系起来。因此,即使在无法进行蛋白质氘代的情况下,这种方法也可能使我们能够了解质子所报告的蛋白质功能的各个方面。

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