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结合RNA测序和蛋白质组分析来鉴定迁徙蝗虫(Melanoplus sanguinipes (F))精液中的蛋白质。

Combining RNA-seq and proteomic profiling to identify seminal fluid proteins in the migratory grasshopper Melanoplus sanguinipes (F).

作者信息

Bonilla Martha L, Todd Christopher, Erlandson Martin, Andres Jose

机构信息

Facultad de Ciencias Agropecuarias, Universidad Nacional de Colombia, A.237. Palmira, Valle del Cauca, Colombia.

Department of Biology, University of Saskatchewan, 112 Science Pl., Saskatoon, SK, S7N-5E2, Canada.

出版信息

BMC Genomics. 2015 Dec 22;16:1096. doi: 10.1186/s12864-015-2327-1.

Abstract

BACKGROUND

Seminal fluid proteins control many aspects of fertilization and in turn, they play a key role in post-mating sexual selection and possibly reproductive isolation. Because effective proteome profiling relies on the availability of high-quality DNA reference databases, our knowledge of these proteins is still largely limited to model organisms with ample genetic resources. New advances in sequencing technology allow for the rapid characterization of transcriptomes at low cost. By combining high throughput RNA-seq and shotgun proteomic profiling, we have characterized the seminal fluid proteins secreted by the primary male accessory gland of the migratory grasshopper (Melanoplus sanguinipes), one of the main agricultural pests in central North America.

RESULTS

Using RNA sequencing, we characterized the transcripts of ~ 8,100 genes expressed in the long hyaline tubules (LHT) of the accessory glands. Proteomic profiling identified 353 proteins expressed in the long hyaline tubules (LHT). Of special interest are seminal fluid proteins (SFPs), such as EJAC-SP, ACE and prostaglandin synthetases, which are known to regulate female oviposition in insects.

CONCLUSIONS

Our study provides new insights into the proteomic components of male ejaculate in Orthopterans, and highlights several important patterns. First, the presence of proteins that lack predicted classical secretory tags in accessory gland proteomes is common in male accessory glands. Second, the products of a few highly expressed genes dominate the accessory gland secretions. Third, accessory gland transcriptomes are enriched for novel transcripts. Fourth, there is conservation of SFPs' functional classes across distantly related taxonomic groups with very different life histories, mating systems and sperm transferring mechanisms. The identified SFPs may serve as targets of future efforts to develop species- specific genetic control strategies.

摘要

背景

精液蛋白控制着受精的许多方面,进而在交配后的性选择以及可能的生殖隔离中发挥关键作用。由于有效的蛋白质组分析依赖于高质量DNA参考数据库的可用性,我们对这些蛋白质的了解在很大程度上仍局限于拥有丰富遗传资源的模式生物。测序技术的新进展使得能够以低成本快速表征转录组。通过结合高通量RNA测序和鸟枪法蛋白质组分析,我们对北美中部主要农业害虫之一的迁徙蝗虫(Melanoplus sanguinipes)主要雄性附腺分泌的精液蛋白进行了表征。

结果

利用RNA测序,我们对附腺长透明小管(LHT)中表达的约8100个基因的转录本进行了表征。蛋白质组分析鉴定出长透明小管(LHT)中表达的353种蛋白质。特别值得关注的是精液蛋白(SFP),如射精蛋白(EJAC-SP)、血管紧张素转换酶(ACE)和前列腺素合成酶,已知它们在昆虫中调节雌性产卵。

结论

我们的研究为直翅目昆虫雄性射精的蛋白质组组成提供了新的见解,并突出了几个重要模式。首先,在附腺蛋白质组中存在缺乏预测经典分泌标签的蛋白质在雄性附腺中很常见。其次,少数高表达基因的产物主导了附腺分泌物。第三,附腺转录组富含新转录本。第四,在具有非常不同生活史、交配系统和精子转移机制的远缘分类群中,精液蛋白的功能类别具有保守性。所鉴定的精液蛋白可能成为未来开发物种特异性遗传控制策略努力的目标。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9c3a/4689059/c697d3a5ede4/12864_2015_2327_Fig1_HTML.jpg

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