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基于全血的智能手机成像芯片上的HIV-1逆转录环介导等温扩增技术(RT-LAMP)

Smartphone-Imaged HIV-1 Reverse-Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) on a Chip from Whole Blood.

作者信息

Damhorst Gregory L, Duarte-Guevara Carlos, Chen Weili, Ghonge Tanmay, Cunningham Brian T, Bashir Rashid

机构信息

Department of Bioengineering, The University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA ; Micro and Nanotechnology Laboratory, The University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

Micro and Nanotechnology Laboratory, The University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA ; Department of Electrical and Computer Engineering, The University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.

出版信息

Engineering (Beijing). 2015 Sep;1(3):324-335. doi: 10.15302/J-ENG-2015072. Epub 2015 Oct 16.

DOI:10.15302/J-ENG-2015072
PMID:26705482
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4687746/
Abstract

Viral load measurements are an essential tool for the long-term clinical care of hum an immunodeficiency virus (HIV)-positive individuals. The gold standards in viral load instrumentation, however, are still too limited by their size, cost, and sophisticated operation for these measurements to be ubiquitous in remote settings with poor healthcare infrastructure, including parts of the world that are disproportionately affected by HIV infection. The challenge of developing a point-of-care platform capable of making viral load more accessible has been frequently approached but no solution has yet emerged that meets the practical requirements of low cost, portability, and ease-of-use. In this paper, we perform reverse-transcription loop-mediated isothermal amplification (RT-LAMP) on minimally processed HIV-spiked whole blood samples with a microfluidic and silicon microchip platform, and perform fluorescence measurements with a consumer smartphone. Our integrated assay shows amplification from as few as three viruses in a ~ 60 nL RT-LAMP droplet, corresponding to a whole blood concentration of 670 viruses per µL of whole blood. The technology contains greater power in a digital RT-LAMP approach that could be scaled up for the determination of viral load from a finger prick of blood in the clinical care of HIV-positive individuals. We demonstrate that all aspects of this viral load approach, from a drop of blood to imaging the RT-LAMP reaction, are compatible with lab-on-a-chip components and mobile instrumentation.

摘要

病毒载量检测是对人类免疫缺陷病毒(HIV)阳性个体进行长期临床护理的重要工具。然而,病毒载量检测仪器的金标准在尺寸、成本和操作复杂性方面仍存在很大限制,以至于在医疗基础设施薄弱的偏远地区(包括世界上受HIV感染影响尤为严重的地区),这些检测方法无法普及。开发一个能够使病毒载量检测更便捷的即时检测平台这一挑战虽常被提及,但尚未出现能满足低成本、便携性和易用性等实际要求的解决方案。在本文中,我们使用微流控和硅微芯片平台对经过最少处理的加样HIV全血样本进行逆转录环介导等温扩增(RT-LAMP),并使用消费级智能手机进行荧光测量。我们的集成检测方法显示,在一个约60 nL的RT-LAMP液滴中,仅从三个病毒就能实现扩增,这相当于每微升全血中含有670个病毒的全血浓度。该技术在数字RT-LAMP方法中具有更大的潜力,可扩大规模用于在HIV阳性个体的临床护理中通过手指采血来测定病毒载量。我们证明,这种病毒载量检测方法的各个方面,从一滴血到对RT-LAMP反应进行成像,都与芯片实验室组件和移动仪器兼容。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/7611dd9ba211/nihms742222f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/89f48507f156/nihms742222f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/368f55c6a37d/nihms742222f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/406dd4547a4f/nihms742222f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/34b4a864f802/nihms742222f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/7fb573f1c531/nihms742222f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/7611dd9ba211/nihms742222f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/89f48507f156/nihms742222f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/368f55c6a37d/nihms742222f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/406dd4547a4f/nihms742222f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/34b4a864f802/nihms742222f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/7fb573f1c531/nihms742222f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/65f7/4687746/7611dd9ba211/nihms742222f6.jpg

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