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棘海马(Hippocampus spinosissimus Weber,1913年)线粒体全基因组的测序与分析(鲽形目:海龙科)

Sequencing and analysis of the complete mitochondrial genome of Hippocampus spinosissimus Weber, 1913 (Gasterosteiformes: Syngnathidae).

作者信息

Wang Zhaokai, Ge Yuqing, Cheng Rubin, Huang Zhen, Chen Zhe, Zhang Guangji

机构信息

a The First Affiliated Hospital , Zhejiang Chinese Medical University , Hangzhou , PR China.

b Engineering Research Center of Marine Biological Resource Comprehensive Utilization , Third Institute of Oceanography, State Oceanic Administration , Xiamen , PR China.

出版信息

Mitochondrial DNA A DNA Mapp Seq Anal. 2017 May;28(3):303-304. doi: 10.3109/19401736.2015.1118088. Epub 2015 Dec 29.

Abstract

abtract The complete mitochondrial genome of the Hedgehog Seahorse (Hippocampus spinosissimus) is 16 530 bp in length, containing 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The gene organization of H. spinosissimus was similar to that observed in most vertebrate creatures. All protein-coding genes use the typical initiation codon ATG, except for COX1 that uses GTG. The overall base composition of H. spinosissimus is 32.2% for A, 22.72% for C, 30.19% for T, and 14.89% for G, with a slight AT bias of 62.39%. Hippocampus spinosissimus showed a closer genetic relationship with H. kelloggi according to the phylogenetic analysis.

摘要

摘要 刺海马(Hippocampus spinosissimus)的线粒体基因组全长16530 bp,包含13个蛋白质编码基因、2个rRNA基因、22个tRNA基因和一个控制区。刺海马的基因组织与大多数脊椎动物中观察到的相似。除COX1使用GTG外,所有蛋白质编码基因均使用典型的起始密码子ATG。刺海马的总体碱基组成为:A占32.2%,C占22.72%,T占30.19%,G占14.89%,AT偏倚率为62.39%,略有AT偏向。系统发育分析表明,刺海马与克氏海马(H. kelloggi)的亲缘关系更近。

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