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基于HIV-1逆转录酶的细胞脱氧核苷酸三磷酸浓度测定法。

HIV-1 Reverse Transcriptase-Based Assay to Determine Cellular dNTP Concentrations.

作者信息

Hollenbaugh Joseph A, Kim Baek

机构信息

Center for Drug Discovery, Emory Center for AIDS Research, Laboratory of Biochemical Pharmacology, Department of Pediatrics, Emory University School of Medicine, 1760 Haygood Drive, Health Sciences Research Building, Atlanta, GA, 30322, USA.

College of Pharmacy, Kyung-Hee University, Seoul, South Korea.

出版信息

Methods Mol Biol. 2016;1354:61-70. doi: 10.1007/978-1-4939-3046-3_5.

DOI:10.1007/978-1-4939-3046-3_5
PMID:26714705
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4839283/
Abstract

Deoxynucleoside triphosphates (dNTPs) are the building blocks of DNA and their biosynthesis is tightly regulated in the cell. HPLC-MS and enzyme-based methods are currently employed to determine dNTP concentrations from cellular extracts. Here, we describe a highly efficient, HIV-1 reverse transcriptase (RT)-based assay to quantitate dNTP concentrations. The assay is based on the ability of HIV-1 RT to function at very low dNTP concentrations, thus providing for the high sensitivity of detection.

摘要

脱氧核苷三磷酸(dNTPs)是DNA的组成成分,其生物合成在细胞中受到严格调控。目前采用高效液相色谱-质谱联用(HPLC-MS)和基于酶的方法来测定细胞提取物中的dNTP浓度。在此,我们描述了一种基于高效HIV-1逆转录酶(RT)的检测方法来定量dNTP浓度。该检测方法基于HIV-1 RT在极低dNTP浓度下仍能发挥作用的能力,从而实现了高灵敏度检测。

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本文引用的文献

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Nucleic Acids Res. 2011 Sep 1;39(17):e112. doi: 10.1093/nar/gkr350. Epub 2011 May 16.
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Quantitation of cellular deoxynucleoside triphosphates.细胞脱氧核苷三磷酸的定量。
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Deoxynucleoside triphosphate incorporation mechanism of foamy virus (FV) reverse transcriptase: implications for cell tropism of FV.泡沫病毒逆转录酶的脱氧核苷三磷酸掺入机制:对泡沫病毒细胞嗜性的影响
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Intracellular water-specific MR of microbead-adherent cells: the HeLa cell intracellular water exchange lifetime.微珠黏附细胞的细胞内水特异性磁共振成像:HeLa细胞的细胞内水交换寿命
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Macrophage tropism of HIV-1 depends on efficient cellular dNTP utilization by reverse transcriptase.HIV-1对巨噬细胞的嗜性取决于逆转录酶对细胞脱氧核苷三磷酸的有效利用。
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