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由SMC进行的DNA凝聚簇的多步组装。

Multistep assembly of DNA condensation clusters by SMC.

作者信息

Kim HyeongJun, Loparo Joseph J

机构信息

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.

出版信息

Nat Commun. 2016 Jan 4;7:10200. doi: 10.1038/ncomms10200.

Abstract

SMC (structural maintenance of chromosomes) family members play essential roles in chromosome condensation, sister chromatid cohesion and DNA repair. It remains unclear how SMCs structure chromosomes and how their mechanochemical cycle regulates their interactions with DNA. Here we used single-molecule fluorescence microscopy to visualize how Bacillus subtilis SMC (BsSMC) interacts with flow-stretched DNAs. We report that BsSMC can slide on DNA, switching between static binding and diffusion. At higher concentrations, BsSMCs form clusters that condense DNA in a weakly ATP-dependent manner. ATP increases the apparent cooperativity of DNA condensation, demonstrating that BsSMC can interact cooperatively through their ATPase head domains. Consistent with these results, ATPase mutants compact DNA more slowly than wild-type BsSMC in the presence of ATP. Our results suggest that transiently static BsSMC molecules can nucleate the formation of clusters that act to locally condense the chromosome while forming long-range DNA bridges.

摘要

染色体结构维持(SMC)家族成员在染色体凝聚、姐妹染色单体黏连和DNA修复过程中发挥着至关重要的作用。目前尚不清楚SMC如何构建染色体结构,以及它们的机械化学循环如何调节与DNA的相互作用。在此,我们利用单分子荧光显微镜来观察枯草芽孢杆菌的SMC(BsSMC)与流动拉伸的DNA如何相互作用。我们报告称,BsSMC能够在DNA上滑动,在静态结合和扩散之间切换。在较高浓度下,BsSMC会形成聚集体,以一种微弱的ATP依赖性方式使DNA凝聚。ATP增加了DNA凝聚的表观协同性,这表明BsSMC能够通过其ATP酶头部结构域进行协同相互作用。与这些结果一致,在ATP存在的情况下,ATP酶突变体使DNA压缩的速度比野生型BsSMC更慢。我们的结果表明,短暂静止的BsSMC分子能够促使聚集体形成,这些聚集体在形成长距离DNA桥的同时,起到局部凝聚染色体的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/532f/4725763/be1c545e0ae6/ncomms10200-f1.jpg

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